Gm57209 Gene Detail

Summary

• Symbol
  Gm57209
• Name
  predicted gene, 57209

• Feature Type
  lncRNA gene
• IDs
  MGI:7338331
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:12683482-12695832 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  481 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338331	lncRNA gene	Chr7:12683482-12695832 (+)
129S1/SvImJ	ENSMUSG00200042555	lncRNA gene	Chr7:6724874-6725883 (+)
A/J	ENSMUSG00195052463	lncRNA gene	Chr7:6409592-6410598 (+)
AKR/J	ENSMUSG00220028753	lncRNA gene	Chr7:5892019-5893033 (+)
BALB/cJ	ENSMUSG00180050932	lncRNA gene	Chr7:6333016-6334022 (+)
C3H/HeJ	ENSMUSG00175050181	lncRNA gene	Chr7:6778218-6779227 (+)
C57BL/6NJ	ENSMUSG00215045204	lncRNA gene	Chr7:7005884-7006893 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028887	lncRNA gene	Chr7:6488153-6489160 (+)
CBA/J	ENSMUSG00210049158	lncRNA gene	Chr7:6047981-6048990 (+)
DBA/2J	ENSMUSG00185044684	lncRNA gene	Chr7:9580615-9581624 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000054845	lncRNA gene	Chr7:9228276-9229285 (+)
LP/J	ENSMUSG00230047048	lncRNA gene	Chr7:13763139-13764148 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225054467	lncRNA gene	Chr7:11244197-11245206 (+)
PWK/PhJ	ENSLUMG00010050955	lncRNA gene	Chr7:10394211-10395220 (+)
SPRET/EiJ	ENSMSPG00010048895	lncRNA gene	Chr7:6557245-6558055 (+)
WSB/EiJ	ENSIUOG00005053570	lncRNA gene	Chr7:18497540-18498546 (-)

Homology

• Gene Tree
  Gm57209
  

Sequences &
Gene Models

• All Sequences
  34

• Ensembl
  ENSMUSG00000120524 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120524	Ensembl Gene Model | MGI Sequence Detail	12351	C57BL/6J
transcript	ENSMUST00000243982	Ensembl | MGI Sequence Detail	1726	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;