Gm57208 Gene Detail

Summary

• Symbol
  Gm57208
• Name
  predicted gene, 57208

• Feature Type
  lncRNA gene
• IDs
  MGI:7338329
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:113780609-113789687 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  412 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338329	lncRNA gene	Chr7:113780609-113789687 (+)
129S1/SvImJ	ENSMUSG00200034966	lncRNA gene	Chr7:100333126-100342005 (+)
A/J	ENSMUSG00195040184	lncRNA gene	Chr7:104837699-104846579 (+)
AKR/J	ENSMUSG00220040838	lncRNA gene	Chr7:98242885-98251764 (+)
BALB/cJ	ENSMUSG00180032983	lncRNA gene	Chr7:101501488-101510366 (+)
C3H/HeJ	ENSMUSG00175027009	lncRNA gene	Chr7:102133286-102142816 (+)
C57BL/6NJ	ENSMUSG00215042512	lncRNA gene	Chr7:101443456-101452512 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044995	lncRNA gene	Chr7:104815438-104824971 (+)
CBA/J	ENSMUSG00210025031	lncRNA gene	Chr7:101960088-101969619 (+)
DBA/2J	ENSMUSG00185023077	lncRNA gene	Chr7:106310402-106319932 (+)
FVB/NJ	ENSMUSG00205050491	lncRNA gene	Chr7:101917603-101926659 (+)
JF1/MsJ	ENSUMUG00000050861	lncRNA gene	Chr7:111344155-111353685 (+)
LP/J	ENSMUSG00230038539	lncRNA gene	Chr7:112419420-112428299 (+)
NOD/ShiLtJ	ENSMUSG00190030495	lncRNA gene	Chr7:102135002-102143881 (+)
NZO/HlLtJ	ENSMUSG00225018961	lncRNA gene	Chr7:110643880-110653410 (+)
PWK/PhJ	ENSLUMG00010043359	lncRNA gene	Chr7:100490685-100500239 (+)
SPRET/EiJ	ENSMSPG00010010001	lncRNA gene	Chr7:101672743-101682319 (+)
WSB/EiJ	ENSIUOG00005012664	lncRNA gene	Chr7:102785204-102794081 (+)

Homology

• Gene Tree
  Gm57208
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000120689 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120689	Ensembl Gene Model | MGI Sequence Detail	9079	C57BL/6J
transcript	ENSMUST00000291468	Ensembl | MGI Sequence Detail	590	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57208:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr68636	Chr7:113780610-113780642 (+)	17 bp