Gm57205 Gene Detail

Summary

• Symbol
  Gm57205
• Name
  predicted gene, 57205

• Feature Type
  lncRNA gene
• IDs
  MGI:7338323
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:19044356-19045108 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338323	lncRNA gene	Chr7:19044356-19045108 (+)
129S1/SvImJ	ENSMUSG00200046268	lncRNA gene	Chr7:12238443-12239204 (+)
A/J	ENSMUSG00195054124	lncRNA gene	Chr7:12680821-12681570 (+)
AKR/J	ENSMUSG00220028379	lncRNA gene	Chr7:11013514-11014263 (+)
BALB/cJ	ENSMUSG00180053800	lncRNA gene	Chr7:12537146-12537895 (+)
C3H/HeJ	ENSMUSG00175053050	lncRNA gene	Chr7:13121000-13121761 (+)
C57BL/6NJ	ENSMUSG00215055023	lncRNA gene	Chr7:11165570-11166319 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052464	lncRNA gene	Chr7:13146701-13147463 (+)
CBA/J	ENSMUSG00210053642	lncRNA gene	Chr7:12347657-12348418 (+)
DBA/2J	ENSMUSG00185055927	lncRNA gene	Chr7:15789996-15790745 (+)
FVB/NJ	ENSMUSG00205051547	lncRNA gene	Chr7:12732892-12733641 (+)
JF1/MsJ	ENSUMUG00000042437	lncRNA gene	Chr7:19105961-19106722 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190052651	lncRNA gene	Chr7:9003864-9004625 (+)
NZO/HlLtJ	ENSMUSG00225054172	lncRNA gene	Chr7:17376536-17377285 (+)
PWK/PhJ	ENSLUMG00010051539	lncRNA gene	Chr7:1952523-1953284 (+)
SPRET/EiJ	ENSMSPG00010051590	lncRNA gene	Chr7:12088470-12089233 (+)
WSB/EiJ	ENSIUOG00005053601	lncRNA gene	Chr7:19529774-19530523 (-)

Homology

• Gene Tree
  Gm57205
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000120590 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120590	Ensembl Gene Model | MGI Sequence Detail	753	C57BL/6J
transcript	ENSMUST00000244383	Ensembl | MGI Sequence Detail	753	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57205:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr2108	Chr7:19044407-19044412 (+)	54 bp