Gm57199 Gene Detail

Summary

• Symbol
  Gm57199
• Name
  predicted gene, 57199

• Feature Type
  lncRNA gene
• IDs
  MGI:7338311
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:140571831-140584699 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  535 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338311	lncRNA gene	Chr7:140571831-140584699 (-)
129S1/SvImJ	ENSMUSG00200048307	lncRNA gene	Chr7:127139083-127144158 (-)
A/J	ENSMUSG00195042209	lncRNA gene	Chr7:131621501-131626580 (-)
AKR/J	ENSMUSG00220035462	lncRNA gene	Chr7:125101996-125107362 (-)
BALB/cJ	ENSMUSG00180041035	lncRNA gene	Chr7:128313693-128318767 (-)
C3H/HeJ	ENSMUSG00175044350	lncRNA gene	Chr7:129041982-129047055 (-)
C57BL/6NJ	ENSMUSG00215047589	lncRNA gene	Chr7:128308524-128313600 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051334	lncRNA gene	Chr7:131615741-131620859 (-)
CBA/J	ENSMUSG00210031162	lncRNA gene	Chr7:128799953-128805046 (-)
DBA/2J	ENSMUSG00185018609	lncRNA gene	Chr7:133078546-133083620 (-)
FVB/NJ	ENSMUSG00205045241	lncRNA gene	Chr7:128720814-128725892 (-)
JF1/MsJ	ENSUMUG00000049821	lncRNA gene	Chr7:138156040-138161204 (-)
LP/J	ENSMUSG00230043016	lncRNA gene	Chr7:139242024-139247104 (-)
NOD/ShiLtJ	ENSMUSG00190033917	lncRNA gene	Chr7:128907450-128912524 (-)
NZO/HlLtJ	ENSMUSG00225052219	lncRNA gene	Chr7:137451267-137456343 (-)
PWK/PhJ	ENSLUMG00010049566	lncRNA gene	Chr7:127287568-127292704 (-)
SPRET/EiJ	ENSMSPG00010043953	lncRNA gene	Chr7:128727040-128731538 (-)
WSB/EiJ	ENSIUOG00005038567	lncRNA gene	Chr7:129642707-129647833 (-)

Homology

• Gene Tree
  Gm57199
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000120542 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120542	Ensembl Gene Model | MGI Sequence Detail	12869	C57BL/6J
transcript	ENSMUST00000365568	Ensembl | MGI Sequence Detail	1287	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;