Gm57195 Gene Detail

Summary

• Symbol
  Gm57195
• Name
  predicted gene, 57195

• Feature Type
  lncRNA gene
• IDs
  MGI:7338303
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:14252099-14284028 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1044 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338303	lncRNA gene	Chr7:14252099-14284028 (+)
129S1/SvImJ	ENSMUSG00200042049	lncRNA gene	Chr7:8337968-8338619 (+)
A/J	ENSMUSG00195053354	lncRNA gene	Chr7:7988476-7989127 (+)
AKR/J	ENSMUSG00220028067	lncRNA gene	Chr7:7378598-7379249 (+)
BALB/cJ	ENSMUSG00180051051	lncRNA gene	Chr7:7919424-7920075 (+)
C3H/HeJ	ENSMUSG00175050980	lncRNA gene	Chr7:8383751-8384402 (+)
C57BL/6NJ	ENSMUSG00215045417	lncRNA gene	Chr7:8607697-8608348 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029600	lncRNA gene	Chr7:7844476-7845125 (+)
CBA/J	ENSMUSG00210048498	lncRNA gene	Chr7:7634788-7635439 (+)
DBA/2J	ENSMUSG00185054727	lncRNA gene	Chr7:11167528-11168179 (+)
FVB/NJ	ENSMUSG00205047022	lncRNA gene	Chr7:8205481-8206132 (+)
JF1/MsJ	ENSUMUG00000043846	lncRNA gene	Chr7:10627495-10628146 (+)
LP/J	ENSMUSG00230047783	lncRNA gene	Chr7:15349867-15350518 (+)
NOD/ShiLtJ	ENSMUSG00190053588	lncRNA gene	Chr7:12240279-12240930 (+)
NZO/HlLtJ	ENSMUSG00225054326	lncRNA gene	Chr7:12810828-12811479 (+)
PWK/PhJ	ENSLUMG00010051235	lncRNA gene	Chr7:11796970-11797621 (+)
SPRET/EiJ	ENSMSPG00010049317	lncRNA gene	Chr7:8040446-8041083 (+)
WSB/EiJ	ENSIUOG00005053795	lncRNA gene	Chr7:16948212-16948863 (-)

Homology

• Gene Tree
  Gm57195
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm57195
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  71

• Ensembl
  ENSMUSG00000120336 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120336	Ensembl Gene Model | MGI Sequence Detail	31930	C57BL/6J
transcript	ENSMUST00000288495	Ensembl | MGI Sequence Detail	1842	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:340071 Ji S, et al., OBOX regulates mouse zygotic genome activation and early development. Nature. 2023 Aug;620(7976):1047-1053

TSS for Gm57195:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64556	Chr7:14252481-14252492 (+)	388 bp