Gm57190 Gene Detail

Summary

• Symbol
  Gm57190
• Name
  predicted gene, 57190

• Feature Type
  lncRNA gene
• IDs
  MGI:7338293
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:101885061-101886737 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338293	lncRNA gene	Chr7:101885061-101886737 (+)
129S1/SvImJ	ENSMUSG00200049947	lncRNA gene	Chr7:88727477-88729153 (+)
A/J	ENSMUSG00195054825	lncRNA gene	Chr7:93233435-93235111 (+)
AKR/J	ENSMUSG00220051475	lncRNA gene	Chr7:86649846-86651522 (+)
BALB/cJ	ENSMUSG00180037269	lncRNA gene	Chr7:89906105-89907781 (+)
C3H/HeJ	ENSMUSG00175023875	lncRNA gene	Chr7:90560265-90561941 (+)
C57BL/6NJ	ENSMUSG00215036847	lncRNA gene	Chr7:89732231-89733907 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053185	lncRNA gene	Chr7:93140196-93141872 (+)
CBA/J	ENSMUSG00210025971	lncRNA gene	Chr7:90413665-90415341 (+)
DBA/2J	ENSMUSG00185057217	lncRNA gene	Chr7:94736166-94737842 (+)
FVB/NJ	ENSMUSG00205041710	lncRNA gene	Chr7:90404285-90405961 (+)
JF1/MsJ	ENSUMUG00000052148	lncRNA gene	Chr7:99637666-99639342 (+)
LP/J	ENSMUSG00230045290	lncRNA gene	Chr7:100837439-100839115 (+)
NOD/ShiLtJ	ENSMUSG00190021588	lncRNA gene	Chr7:90676955-90678631 (+)
NZO/HlLtJ	ENSMUSG00225051568	lncRNA gene	Chr7:99072448-99074124 (+)
PWK/PhJ	ENSLUMG00010050195	lncRNA gene	Chr7:88886451-88888127 (+)
SPRET/EiJ	ENSMSPG00010013247	lncRNA gene	Chr7:90132685-90134365 (+)
WSB/EiJ	ENSIUOG00005011049	lncRNA gene	Chr7:90999507-91001183 (+)

Homology

• Gene Tree
  Gm57190
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000111339 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111339	Ensembl Gene Model | MGI Sequence Detail	1677	C57BL/6J
transcript	ENSMUST00000214560	Ensembl | MGI Sequence Detail	606	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;