Gm57183 Gene Detail

Summary

• Symbol
  Gm57183
• Name
  predicted gene, 57183

• Feature Type
  lncRNA gene
• IDs
  MGI:7338279
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:74200416-74220795 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  779 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338279	lncRNA gene	Chr1:74200416-74220795 (-)
129S1/SvImJ	ENSMUSG00200035561	lncRNA gene	Chr1:71877901-71883720 (-)
A/J	ENSMUSG00195010454	lncRNA gene	Chr1:71303090-71308907 (-)
AKR/J	ENSMUSG00220010516	lncRNA gene	Chr1:71448571-71454398 (-)
BALB/cJ	ENSMUSG00180019777	lncRNA gene	Chr1:71561615-71567463 (-)
C3H/HeJ	ENSMUSG00175017838	lncRNA gene	Chr1:71703496-71709318 (-)
C57BL/6NJ	ENSMUSG00215029182	lncRNA gene	Chr1:71606942-71612766 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028923	lncRNA gene	Chr1:71332371-71338212 (-)
CBA/J	ENSMUSG00210043502	lncRNA gene	Chr1:71387776-71393596 (-)
DBA/2J	ENSMUSG00185033113	lncRNA gene	Chr1:72481252-72487069 (-)
FVB/NJ	ENSMUSG00205040936	lncRNA gene	Chr1:71056558-71062388 (-)
JF1/MsJ	ENSUMUG00000006513	lncRNA gene	Chr1:71378094-71383851 (-)
LP/J	ENSMUSG00230014013	lncRNA gene	Chr1:72471085-72476913 (-)
NOD/ShiLtJ	ENSMUSG00190039439	lncRNA gene	Chr1:71614045-71619788 (-)
NZO/HlLtJ	ENSMUSG00225040739	lncRNA gene	Chr1:75686206-75692026 (-)
PWK/PhJ	ENSLUMG00010014254	lncRNA gene	Chr1:70955686-70961420 (-)
SPRET/EiJ	ENSMSPG00010020314	lncRNA gene	Chr1:73056832-73062410 (-)
WSB/EiJ	ENSIUOG00005013965	lncRNA gene	Chr1:71235310-71241144 (-)

Homology

• Gene Tree
  Gm57183
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000121276 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121276	Ensembl Gene Model | MGI Sequence Detail	20380	C57BL/6J
transcript	ENSMUST00000264749	Ensembl | MGI Sequence Detail	905	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57183:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr12286	Chr1:74220767-74220796 (-)	13 bp
Tssr119	Chr1:74217799-74217805 (-)	2,993 bp