Gm57156 Gene Detail

Summary

• Symbol
  Gm57156
• Name
  predicted gene, 57156

• Feature Type
  lncRNA gene
• IDs
  MGI:7338225
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:46854224-46855919 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338225	lncRNA gene	Chr4:46854224-46855919 (+)
129S1/SvImJ	ENSMUSG00200003360	lncRNA gene	Chr4:42904964-42906610 (+)
A/J	ENSMUSG00195006711	lncRNA gene	Chr4:43348865-43350512 (+)
AKR/J	ENSMUSG00220002973	lncRNA gene	Chr4:43058322-43059969 (+)
BALB/cJ	ENSMUSG00180031134	lncRNA gene	Chr4:42935509-42937156 (+)
C3H/HeJ	ENSMUSG00175021578	lncRNA gene	Chr4:43084920-43086567 (+)
C57BL/6NJ	ENSMUSG00215025834	lncRNA gene	Chr4:42881527-42883174 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039260	lncRNA gene	Chr4:43123559-43125206 (+)
CBA/J	ENSMUSG00210019576	lncRNA gene	Chr4:42782455-42784102 (+)
DBA/2J	ENSMUSG00185034390	lncRNA gene	Chr4:43145906-43147553 (+)
FVB/NJ	ENSMUSG00205025196	lncRNA gene	Chr4:42443872-42445519 (+)
JF1/MsJ	ENSUMUG00000037957	lncRNA gene	Chr4:43353081-43354729 (+)
LP/J	ENSMUSG00230042762	lncRNA gene	Chr4:46705922-46707568 (+)
NOD/ShiLtJ	ENSMUSG00190026754	lncRNA gene	Chr4:43016365-43018012 (+)
NZO/HlLtJ	ENSMUSG00225006981	lncRNA gene	Chr4:51309128-51310775 (+)
PWK/PhJ	ENSLUMG00010013203	lncRNA gene	Chr4:42366615-42368263 (+)
SPRET/EiJ	ENSMSPG00010009649	lncRNA gene	Chr4:43291157-43292804 (+)
WSB/EiJ	ENSIUOG00005004412	lncRNA gene	Chr4:42752908-42754555 (+)

Homology

• Gene Tree
  Gm57156
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120168 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120168	Ensembl Gene Model | MGI Sequence Detail	1696	C57BL/6J
transcript	ENSMUST00000241719	Ensembl | MGI Sequence Detail	1696	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57156:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37146	Chr4:46854270-46854292 (+)	57 bp