Gm57137 Gene Detail

Summary

• Symbol
  Gm57137
• Name
  predicted gene, 57137

• Feature Type
  lncRNA gene
• IDs
  MGI:7338187
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:66762713-66764269 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338187	lncRNA gene	Chr4:66762713-66764269 (+)
129S1/SvImJ	ENSMUSG00200000630	lncRNA gene	Chr4:61750221-61751777 (+)
A/J	ENSMUSG00195000963	lncRNA gene	Chr4:62313916-62315472 (+)
AKR/J	ENSMUSG00220018832	lncRNA gene	Chr4:62008271-62009827 (+)
BALB/cJ	ENSMUSG00180000860	lncRNA gene	Chr4:61291799-61293358 (+)
C3H/HeJ	ENSMUSG00175006788	lncRNA gene	Chr4:62111892-62113448 (+)
C57BL/6NJ	ENSMUSG00215000928	lncRNA gene	Chr4:62176359-62177915 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014872	lncRNA gene	Chr4:61883763-61885319 (+)
CBA/J	ENSMUSG00210000725	lncRNA gene	Chr4:61822612-61824168 (+)
DBA/2J	ENSMUSG00185015709	lncRNA gene	Chr4:62251458-62253014 (+)
FVB/NJ	ENSMUSG00205021071	lncRNA gene	Chr4:60504721-60506277 (+)
JF1/MsJ	ENSUMUG00000000760	lncRNA gene	Chr4:62897596-62899153 (+)
LP/J	ENSMUSG00230011621	lncRNA gene	Chr4:65753559-65755115 (+)
NOD/ShiLtJ	ENSMUSG00190009288	lncRNA gene	Chr4:61215786-61217342 (+)
NZO/HlLtJ	ENSMUSG00225013614	lncRNA gene	Chr4:70787358-70788914 (+)
PWK/PhJ	ENSLUMG00010010406	lncRNA gene	Chr4:60658917-60660464 (+)
SPRET/EiJ	ENSMSPG00010005160	lncRNA gene	Chr4:61865863-61867411 (+)
WSB/EiJ	ENSIUOG00005000413	lncRNA gene	Chr4:61590279-61591835 (+)

Homology

• Gene Tree
  Gm57137
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121059 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121059	Ensembl Gene Model | MGI Sequence Detail	1557	C57BL/6J
transcript	ENSMUST00000247025	Ensembl | MGI Sequence Detail	1557	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57137:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37616	Chr4:66762716-66762725 (+)	8 bp