Gm57134 Gene Detail

Summary

• Symbol
  Gm57134
• Name
  predicted gene, 57134

• Feature Type
  lncRNA gene
• IDs
  MGI:7338181
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:134483854-134484840 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338181	lncRNA gene	Chr1:134483854-134484840 (-)
129S1/SvImJ	ENSMUSG00200009374	lncRNA gene	Chr1:132083822-132084277 (-)
A/J	ENSMUSG00195044800	lncRNA gene	Chr1:131158487-131158953 (-)
AKR/J	ENSMUSG00220051139	lncRNA gene	Chr1:131028405-131028871 (-)
BALB/cJ	ENSMUSG00180040376	lncRNA gene	Chr1:131711665-131712131 (-)
C3H/HeJ	ENSMUSG00175046329	lncRNA gene	Chr1:131402701-131403167 (-)
C57BL/6NJ	ENSMUSG00215046367	lncRNA gene	Chr1:131413338-131413804 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038827	lncRNA gene	Chr1:130321030-130321496 (-)
CBA/J	ENSMUSG00210028338	lncRNA gene	Chr1:131334184-131334650 (-)
DBA/2J	ENSMUSG00185033521	lncRNA gene	Chr1:135695102-135695568 (-)
FVB/NJ	ENSMUSG00205046343	lncRNA gene	Chr1:130665832-130666298 (-)
JF1/MsJ	ENSUMUG00000049908	lncRNA gene	Chr1:134844812-134845278 (-)
LP/J	ENSMUSG00230039129	lncRNA gene	Chr1:135246482-135246948 (-)
NOD/ShiLtJ	ENSMUSG00190046753	lncRNA gene	Chr1:131348283-131348749 (-)
NZO/HlLtJ	ENSMUSG00225021951	lncRNA gene	Chr1:138998579-138999045 (-)
PWK/PhJ	ENSLUMG00010028743	lncRNA gene	Chr1:130470095-130470561 (-)
SPRET/EiJ	ENSMSPG00010046639	lncRNA gene	Chr1:133268735-133269201 (-)
WSB/EiJ	ENSIUOG00005048855	lncRNA gene	Chr1:131082616-131083082 (-)

Homology

• Gene Tree
  Gm57134
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120829 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120829	Ensembl Gene Model | MGI Sequence Detail	987	C57BL/6J
transcript	ENSMUST00000246008	Ensembl | MGI Sequence Detail	987	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57134:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr13798	Chr1:134484725-134484740 (-)	107 bp