Gm57128 Gene Detail

Summary

• Symbol
  Gm57128
• Name
  predicted gene, 57128

• Feature Type
  lncRNA gene
• IDs
  MGI:7338169
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:153687275-153717234 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1176 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338169	lncRNA gene	Chr4:153687275-153717234 (-)
129S1/SvImJ	ENSMUSG00200019834	lncRNA gene	Chr4:144775949-144784956 (-)
A/J	ENSMUSG00195020483	lncRNA gene	Chr4:146418247-146427253 (-)
AKR/J	ENSMUSG00220027143	lncRNA gene	Chr4:146004851-146013857 (-)
BALB/cJ	ENSMUSG00180002689	lncRNA gene	Chr4:144092707-144101714 (-)
C3H/HeJ	ENSMUSG00175019767	lncRNA gene	Chr4:147385209-147394215 (-)
C57BL/6NJ	ENSMUSG00215028115	lncRNA gene	Chr4:146222965-146231971 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036276	lncRNA gene	Chr4:150092389-150101522 (-)
CBA/J	ENSMUSG00210005883	lncRNA gene	Chr4:146043438-146052444 (-)
DBA/2J	ENSMUSG00185016685	lncRNA gene	Chr4:149600660-149609666 (-)
FVB/NJ	ENSMUSG00205023222	lncRNA gene	Chr4:144498436-144507442 (-)
JF1/MsJ	ENSUMUG00000000444	lncRNA gene	Chr4:152624679-152633652 (-)
LP/J	ENSMUSG00230025888	lncRNA gene	Chr4:156329028-156338034 (-)
NOD/ShiLtJ	ENSMUSG00190004120	lncRNA gene	Chr4:145701003-145710009 (-)
NZO/HlLtJ	ENSMUSG00225024585	lncRNA gene	Chr4:160322615-160331622 (-)
PWK/PhJ	ENSLUMG00010027832	lncRNA gene	Chr4:144890279-144899305 (-)
SPRET/EiJ	ENSMSPG00010026049	lncRNA gene	Chr4:146838844-146847479 (-)
WSB/EiJ	ENSIUOG00005006966	lncRNA gene	Chr4:143914199-143923200 (-)

Homology

• Gene Tree
  Gm57128
  

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000121000 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121000	Ensembl Gene Model | MGI Sequence Detail	29960	C57BL/6J
transcript	ENSMUST00000246820	Ensembl | MGI Sequence Detail	1375	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57128:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr44847	Chr4:153716671-153716679 (-)	559 bp