Gm57126 Gene Detail

Summary

• Symbol
  Gm57126
• Name
  predicted gene, 57126

• Feature Type
  lncRNA gene
• IDs
  MGI:7338165
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:118426235-118427560 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338165	lncRNA gene	Chr4:118426235-118427560 (+)
129S1/SvImJ	ENSMUSG00200014420	lncRNA gene	Chr4:112328119-112329439 (+)
A/J	ENSMUSG00195032626	lncRNA gene	Chr4:113573774-113575094 (+)
AKR/J	ENSMUSG00220022062	lncRNA gene	Chr4:112932721-112934041 (+)
BALB/cJ	ENSMUSG00180045893	lncRNA gene	Chr4:111645534-111646854 (+)
C3H/HeJ	ENSMUSG00175025807	lncRNA gene	Chr4:112658724-112660044 (+)
C57BL/6NJ	ENSMUSG00215038968	lncRNA gene	Chr4:113761395-113762715 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046418	lncRNA gene	Chr4:112426392-112427698 (+)
CBA/J	ENSMUSG00210052733	lncRNA gene	Chr4:112265293-112266613 (+)
DBA/2J	ENSMUSG00185048112	lncRNA gene	Chr4:113808859-113810179 (+)
FVB/NJ	ENSMUSG00205044350	lncRNA gene	Chr4:111741500-111742820 (+)
JF1/MsJ	ENSUMUG00000027129	lncRNA gene	Chr4:113726848-113728156 (+)
LP/J	ENSMUSG00230047235	lncRNA gene	Chr4:117145919-117147239 (+)
NOD/ShiLtJ	ENSMUSG00190045447	lncRNA gene	Chr4:111640737-111642057 (+)
NZO/HlLtJ	ENSMUSG00225011154	lncRNA gene	Chr4:122759526-122760843 (+)
PWK/PhJ	ENSLUMG00010047965	lncRNA gene	Chr4:111109496-111110804 (+)
SPRET/EiJ	ENSMSPG00010043119	lncRNA gene	Chr4:113186154-113187482 (+)
WSB/EiJ	ENSIUOG00005048618	lncRNA gene	Chr4:111952871-111954191 (+)

Homology

• Gene Tree
  Gm57126
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000120991 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120991	Ensembl Gene Model | MGI Sequence Detail	1326	C57BL/6J
transcript	ENSMUST00000246791	Ensembl | MGI Sequence Detail	1326	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57126:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38670	Chr4:118426237-118426242 (+)	5 bp