Gm57125 Gene Detail

Summary

• Symbol
  Gm57125
• Name
  predicted gene, 57125

• Feature Type
  lncRNA gene
• IDs
  MGI:7338163
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:41465190-41465464 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338163	lncRNA gene	Chr4:41465190-41465464 (+)
129S1/SvImJ	ENSMUSG00200005474	lncRNA gene	Chr4:38312596-38312870 (+)
A/J	ENSMUSG00195003479	lncRNA gene	Chr4:38683208-38683482 (+)
AKR/J	ENSMUSG00220036882	lncRNA gene	Chr4:38511950-38512224 (+)
BALB/cJ	ENSMUSG00180026148	lncRNA gene	Chr4:38270006-38270280 (+)
C3H/HeJ	ENSMUSG00175023734	lncRNA gene	Chr4:38648632-38648906 (+)
C57BL/6NJ	ENSMUSG00215035001	lncRNA gene	Chr4:38286320-38286594 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004901	lncRNA gene	Chr4:38146401-38146675 (+)
CBA/J	ENSMUSG00210007974	lncRNA gene	Chr4:38349542-38349816 (+)
DBA/2J	ENSMUSG00185006516	lncRNA gene	Chr4:38423321-38423595 (+)
FVB/NJ	ENSMUSG00205027642	lncRNA gene	Chr4:37974137-37974411 (+)
JF1/MsJ	ENSUMUG00000028990	lncRNA gene	Chr4:38367545-38367819 (+)
LP/J	ENSMUSG00230043108	lncRNA gene	Chr4:41806142-41806416 (+)
NOD/ShiLtJ	ENSMUSG00190006218	lncRNA gene	Chr4:38373190-38373464 (+)
NZO/HlLtJ	ENSMUSG00225007139	lncRNA gene	Chr4:45682202-45682476 (+)
PWK/PhJ	ENSLUMG00010006975	lncRNA gene	Chr4:37923771-37924045 (+)
SPRET/EiJ	ENSMSPG00010025907	lncRNA gene	Chr4:38867140-38867414 (+)
WSB/EiJ	ENSIUOG00005049915	lncRNA gene	Chr4:38229204-38229478 (+)

Homology

• Gene Tree
  Gm57125
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120968 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120968	Ensembl Gene Model | MGI Sequence Detail	275	C57BL/6J
transcript	ENSMUST00000246707	Ensembl | MGI Sequence Detail	275	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;