Gm57094 Gene Detail

Summary

• Symbol
  Gm57094
• Name
  predicted gene, 57094

• Feature Type
  lncRNA gene
• IDs
  MGI:7338101
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:129334842-129340767 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338101	lncRNA gene	Chr4:129334842-129340767 (-)
129S1/SvImJ	ENSMUSG00200021264	lncRNA gene	Chr4:122771482-122777377 (-)
A/J	ENSMUSG00195045374	lncRNA gene	Chr4:124111723-124117648 (-)
AKR/J	ENSMUSG00220047444	lncRNA gene	Chr4:123103243-123109169 (-)
BALB/cJ	ENSMUSG00180049294	lncRNA gene	Chr4:121745421-121751344 (-)
C3H/HeJ	ENSMUSG00175046434	lncRNA gene	Chr4:122758027-122763950 (-)
C57BL/6NJ	ENSMUSG00215052141	lncRNA gene	Chr4:124259092-124265013 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005049282	lncRNA gene	Chr4:123639117-123645067 (-)
CBA/J	ENSMUSG00210053914	lncRNA gene	Chr4:122387041-122392964 (-)
DBA/2J	ENSMUSG00185052596	lncRNA gene	Chr4:123919396-123925321 (-)
FVB/NJ	ENSMUSG00205048659	lncRNA gene	Chr4:122146057-122151957 (-)
JF1/MsJ	ENSUMUG00000045596	lncRNA gene	Chr4:124561672-124567809 (-)
LP/J	ENSMUSG00230039309	lncRNA gene	Chr4:127708942-127714837 (-)
NOD/ShiLtJ	ENSMUSG00190048762	lncRNA gene	Chr4:122151355-122157265 (-)
NZO/HlLtJ	ENSMUSG00225026776	lncRNA gene	Chr4:133630326-133636251 (-)
PWK/PhJ	ENSLUMG00010050673	lncRNA gene	Chr4:121602741-121608864 (-)
SPRET/EiJ	ENSMSPG00010047039	lncRNA gene	Chr4:123670965-123676889 (-)
WSB/EiJ	ENSIUOG00005045226	lncRNA gene	Chr4:122006967-122013088 (-)

Homology

• Gene Tree
  Gm57094
  

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00000120090 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120090	Ensembl Gene Model | MGI Sequence Detail	5926	C57BL/6J
transcript	ENSMUST00000274519	Ensembl | MGI Sequence Detail	970	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57094:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr43502	Chr4:129340759-129340764 (-)	5 bp