Gm57092 Gene Detail

Summary

• Symbol
  Gm57092
• Name
  predicted gene, 57092

• Feature Type
  lncRNA gene
• IDs
  MGI:7338097
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:135604218-135604770 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338097	lncRNA gene	Chr4:135604218-135604770 (+)
129S1/SvImJ	ENSMUSG00200021277	lncRNA gene	Chr4:129022553-129023069 (+)
A/J	ENSMUSG00195044050	lncRNA gene	Chr4:130376297-130376813 (+)
AKR/J	ENSMUSG00220047603	lncRNA gene	Chr4:129369594-129370111 (+)
BALB/cJ	ENSMUSG00180050166	lncRNA gene	Chr4:128008801-128009318 (+)
C3H/HeJ	ENSMUSG00175047147	lncRNA gene	Chr4:129028841-129029358 (+)
C57BL/6NJ	ENSMUSG00215052516	lncRNA gene	Chr4:130544066-130544583 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048732	lncRNA gene	Chr4:129946086-129946602 (+)
CBA/J	ENSMUSG00210053891	lncRNA gene	Chr4:128652754-128653271 (+)
DBA/2J	ENSMUSG00185053407	lncRNA gene	Chr4:130182126-130182643 (+)
FVB/NJ	ENSMUSG00205048972	lncRNA gene	Chr4:128425530-128426047 (+)
JF1/MsJ	ENSUMUG00000049334	lncRNA gene	Chr4:130878916-130879433 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190048801	lncRNA gene	Chr4:128414273-128414790 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010050299	lncRNA gene	Chr4:127860893-127861410 (+)
SPRET/EiJ	ENSMSPG00010045767	lncRNA gene	Chr4:129927236-129927751 (+)
WSB/EiJ	ENSIUOG00005045770	lncRNA gene	Chr4:128316518-128317035 (+)

Homology

• Gene Tree
  Gm57092
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000120631 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120631	Ensembl Gene Model | MGI Sequence Detail	553	C57BL/6J
transcript	ENSMUST00000244711	Ensembl | MGI Sequence Detail	553	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57092:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr39649	Chr4:135604238-135604251 (+)	27 bp