Gm57086 Gene Detail

Summary

• Symbol
  Gm57086
• Name
  predicted gene, 57086

• Feature Type
  lncRNA gene
• IDs
  MGI:7338085
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:155029364-155030990 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338085	lncRNA gene	Chr4:155029364-155030990 (-)
129S1/SvImJ	ENSMUSG00200019918	lncRNA gene	Chr4:146083806-146084792 (-)
A/J	ENSMUSG00195020424	lncRNA gene	Chr4:147744225-147745211 (-)
AKR/J	ENSMUSG00220028207	lncRNA gene	Chr4:147325268-147326254 (-)
BALB/cJ	ENSMUSG00180002636	lncRNA gene	Chr4:145399003-145399989 (-)
C3H/HeJ	ENSMUSG00175019575	lncRNA gene	Chr4:148705104-148706090 (-)
C57BL/6NJ	ENSMUSG00215026345	lncRNA gene	Chr4:147550947-147551947 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035099	lncRNA gene	Chr4:151410684-151411744 (-)
CBA/J	ENSMUSG00210006086	lncRNA gene	Chr4:147363427-147364413 (-)
DBA/2J	ENSMUSG00185017198	lncRNA gene	Chr4:150921020-150922006 (-)
FVB/NJ	ENSMUSG00205021640	lncRNA gene	Chr4:145817190-145818176 (-)
JF1/MsJ	ENSUMUG00000000408	lncRNA gene	Chr4:153953535-153954546 (-)
LP/J	ENSMUSG00230025885	lncRNA gene	Chr4:157646979-157647965 (-)
NOD/ShiLtJ	ENSMUSG00190004202	lncRNA gene	Chr4:147020826-147021812 (-)
NZO/HlLtJ	ENSMUSG00225024581	lncRNA gene	Chr4:161643219-161644219 (-)
PWK/PhJ	ENSLUMG00010027728	lncRNA gene	Chr4:146210051-146211058 (-)
SPRET/EiJ	ENSMSPG00010026425	lncRNA gene	Chr4:148149801-148150798 (-)
WSB/EiJ	ENSIUOG00005006921	lncRNA gene	Chr4:145231973-145232973 (-)

Homology

• Gene Tree
  Gm57086
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120490 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120490	Ensembl Gene Model | MGI Sequence Detail	1627	C57BL/6J
transcript	ENSMUST00000243678	Ensembl | MGI Sequence Detail	1627	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57086:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr44913	Chr4:155030900-155030903 (-)	88 bp