Gm57077 Gene Detail

Summary

• Symbol
  Gm57077
• Name
  predicted gene, 57077

• Feature Type
  lncRNA gene
• IDs
  MGI:7338067
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:69162421-69313807 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3977 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338067	lncRNA gene	Chr4:69162421-69313807 (-)
129S1/SvImJ	ENSMUSG00200000534	lncRNA gene	Chr4:64223730-64312045 (-)
A/J	ENSMUSG00195000955	lncRNA gene	Chr4:64793582-64881892 (-)
AKR/J	ENSMUSG00220018770	lncRNA gene	Chr4:64488321-64576637 (-)
BALB/cJ	ENSMUSG00180000863	lncRNA gene	Chr4:63764148-63852457 (-)
C3H/HeJ	ENSMUSG00175006671	lncRNA gene	Chr4:64586314-64674623 (-)
C57BL/6NJ	ENSMUSG00215000939	lncRNA gene	Chr4:64639516-64727827 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014728	lncRNA gene	Chr4:64375318-64468757 (-)
CBA/J	ENSMUSG00210000666	lncRNA gene	Chr4:64288382-64376684 (-)
DBA/2J	ENSMUSG00185015672	lncRNA gene	Chr4:64714608-64802913 (-)
FVB/NJ	ENSMUSG00205001099	lncRNA gene	Chr4:62968032-63053226 (-)
JF1/MsJ	ENSUMUG00000000691	lncRNA gene	Chr4:65365618-65450017 (-)
LP/J	ENSMUSG00230011549	lncRNA gene	Chr4:68215237-68303547 (-)
NOD/ShiLtJ	ENSMUSG00190009252	lncRNA gene	Chr4:63687518-63775816 (-)
NZO/HlLtJ	ENSMUSG00225028051	lncRNA gene	Chr4:73250494-73338479 (-)
PWK/PhJ	ENSLUMG00010010147	lncRNA gene	Chr4:63130999-63214924 (-)
SPRET/EiJ	ENSMSPG00010005153	lncRNA gene	Chr4:64430076-64524903 (-)
WSB/EiJ	ENSIUOG00005000399	lncRNA gene	Chr4:64067169-64149769 (-)

Homology

• Gene Tree
  Gm57077
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000120491 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120491	Ensembl Gene Model | MGI Sequence Detail	151387	C57BL/6J
transcript	ENSMUST00000343866	Ensembl | MGI Sequence Detail	953	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57077:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr42102	Chr4:69313680-69313726 (-)	104 bp