Gm57076 Gene Detail

Summary

• Symbol
  Gm57076
• Name
  predicted gene, 57076

• Feature Type
  lncRNA gene
• IDs
  MGI:7338065
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:31824530-31925017 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2662 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338065	lncRNA gene	Chr4:31824530-31925017 (-)
129S1/SvImJ	ENSMUSG00200012825	lncRNA gene	Chr4:28529036-28581175 (-)
A/J	ENSMUSG00195000254	lncRNA gene	Chr4:29048261-29100418 (-)
AKR/J	ENSMUSG00220014726	lncRNA gene	Chr4:28840600-28892759 (-)
BALB/cJ	ENSMUSG00180000270	lncRNA gene	Chr4:28551415-28603556 (-)
C3H/HeJ	ENSMUSG00175002360	lncRNA gene	Chr4:29013345-29065492 (-)
C57BL/6NJ	ENSMUSG00215000989	lncRNA gene	Chr4:28623888-28675977 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000451	lncRNA gene	Chr4:28504143-28557347 (-)
CBA/J	ENSMUSG00210004987	lncRNA gene	Chr4:28738047-28790196 (-)
DBA/2J	ENSMUSG00185000406	lncRNA gene	Chr4:28810457-28862602 (-)
FVB/NJ	ENSMUSG00205000528	lncRNA gene	Chr4:28395575-28447723 (-)
JF1/MsJ	ENSUMUG00000002714	lncRNA gene	Chr4:28844597-28904063 (-)
LP/J	ENSMUSG00230001135	lncRNA gene	Chr4:32099747-32151888 (-)
NOD/ShiLtJ	ENSMUSG00190000427	lncRNA gene	Chr4:28734851-28786990 (-)
NZO/HlLtJ	ENSMUSG00225008703	lncRNA gene	Chr4:36055932-36108016 (-)
PWK/PhJ	ENSLUMG00010007770	lncRNA gene	Chr4:28306666-28359822 (-)
SPRET/EiJ	ENSMSPG00010002524	lncRNA gene	Chr4:29128003-29189305 (-)
WSB/EiJ	ENSIUOG00005005326	lncRNA gene	Chr4:28544871-28597006 (-)

Homology

• Gene Tree
  Gm57076
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  5
• Gene trapped
  5
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00000120487 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120487	Ensembl Gene Model | MGI Sequence Detail	100488	C57BL/6J
transcript	ENSMUST00000366480	Ensembl | MGI Sequence Detail	2942	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm57076:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr41129	Chr4:31877530-31877542 (-)	47,481 bp