Gm57070 Gene Detail

Summary

• Symbol
  Gm57070
• Name
  predicted gene, 57070

• Feature Type
  lncRNA gene
• IDs
  MGI:7338053
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:128912476-128943215 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  424 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338053	lncRNA gene	Chr4:128912476-128943215 (-)
129S1/SvImJ	ENSMUSG00200021073	lncRNA gene	Chr4:122350842-122360812 (-)
A/J	ENSMUSG00195043897	lncRNA gene	Chr4:123690718-123703521 (-)
AKR/J	ENSMUSG00220047646	lncRNA gene	Chr4:122681602-122694408 (-)
BALB/cJ	ENSMUSG00180046678	lncRNA gene	Chr4:121324420-121337223 (-)
C3H/HeJ	ENSMUSG00175027214	lncRNA gene	Chr4:122337020-122349826 (-)
C57BL/6NJ	ENSMUSG00215052217	lncRNA gene	Chr4:123837868-123850670 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048446	lncRNA gene	Chr4:123220863-123231048 (-)
CBA/J	ENSMUSG00210053917	lncRNA gene	Chr4:121965880-121978682 (-)
DBA/2J	ENSMUSG00185052978	lncRNA gene	Chr4:123498443-123511245 (-)
FVB/NJ	ENSMUSG00205028682	lncRNA gene	Chr4:121724444-121734402 (-)
JF1/MsJ	ENSUMUG00000046230	lncRNA gene	Chr4:124142480-124151618 (-)
LP/J	ENSMUSG00230039231	lncRNA gene	Chr4:127288333-127298304 (-)
NOD/ShiLtJ	ENSMUSG00190048848	lncRNA gene	Chr4:121724447-121734423 (-)
NZO/HlLtJ	ENSMUSG00225026797	lncRNA gene	Chr4:133209104-133221910 (-)
PWK/PhJ	ENSLUMG00010051183	lncRNA gene	Chr4:121183078-121192119 (-)
SPRET/EiJ	ENSMSPG00010044497	lncRNA gene	Chr4:123258844-123267681 (-)
WSB/EiJ	ENSIUOG00005047383	lncRNA gene	Chr4:121581657-121594446 (-)

Homology

• Gene Tree
  Gm57070
  

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000120256 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120256	Ensembl Gene Model | MGI Sequence Detail	30740	C57BL/6J
transcript	ENSMUST00000269581	Ensembl | MGI Sequence Detail	642	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57070:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr43453	Chr4:128926494-128926523 (-)	16,706 bp