Gm57069 Gene Detail

Summary

• Symbol
  Gm57069
• Name
  predicted gene, 57069

• Feature Type
  lncRNA gene
• IDs
  MGI:7338051
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:126149936-126152306 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338051	lncRNA gene	Chr4:126149936-126152306 (+)
129S1/SvImJ	ENSMUSG00200014613	lncRNA gene	Chr4:119588465-119590263 (+)
A/J	ENSMUSG00195034621	lncRNA gene	Chr4:120924329-120926150 (+)
AKR/J	ENSMUSG00220022201	lncRNA gene	Chr4:119904092-119905890 (+)
BALB/cJ	ENSMUSG00180046192	lncRNA gene	Chr4:118562616-118564445 (+)
C3H/HeJ	ENSMUSG00175025395	lncRNA gene	Chr4:119575392-119577220 (+)
C57BL/6NJ	ENSMUSG00215039007	lncRNA gene	Chr4:121067691-121069505 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046279	lncRNA gene	Chr4:120446272-120448069 (+)
CBA/J	ENSMUSG00210052540	lncRNA gene	Chr4:119204293-119206121 (+)
DBA/2J	ENSMUSG00185048850	lncRNA gene	Chr4:120736911-120738740 (+)
FVB/NJ	ENSMUSG00205027155	lncRNA gene	Chr4:118944875-118946676 (+)
JF1/MsJ	ENSUMUG00000024230	lncRNA gene	Chr4:121375261-121377051 (+)
LP/J	ENSMUSG00230039116	lncRNA gene	Chr4:124526163-124527961 (+)
NOD/ShiLtJ	ENSMUSG00190047829	lncRNA gene	Chr4:118944448-118946248 (+)
NZO/HlLtJ	ENSMUSG00225016176	lncRNA gene	Chr4:130433295-130435096 (+)
PWK/PhJ	ENSLUMG00010046793	lncRNA gene	Chr4:118410345-118412186 (+)
SPRET/EiJ	ENSMSPG00010043538	lncRNA gene	Chr4:120470069-120471845 (+)
WSB/EiJ	ENSIUOG00005048930	lncRNA gene	Chr4:118810690-118812525 (+)

Homology

• Gene Tree
  Gm57069
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120228 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120228	Ensembl Gene Model | MGI Sequence Detail	2371	C57BL/6J
transcript	ENSMUST00000241994	Ensembl | MGI Sequence Detail	2371	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57069:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38985	Chr4:126150449-126150455 (+)	516 bp