Gm57068 Gene Detail

Summary

• Symbol
  Gm57068
• Name
  predicted gene, 57068

• Feature Type
  lncRNA gene
• IDs
  MGI:7338049
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:57955184-57970349 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  484 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338049	lncRNA gene	Chr4:57955184-57970349 (+)
129S1/SvImJ	ENSMUSG00200004116	lncRNA gene	Chr4:54007217-54009347 (+)
A/J	ENSMUSG00195008317	lncRNA gene	Chr4:54414100-54416230 (+)
AKR/J	ENSMUSG00220006519	lncRNA gene	Chr4:54196452-54198582 (+)
BALB/cJ	ENSMUSG00180030188	lncRNA gene	Chr4:54009060-54011190 (+)
C3H/HeJ	ENSMUSG00175022218	lncRNA gene	Chr4:54164908-54167038 (+)
C57BL/6NJ	ENSMUSG00215030981	lncRNA gene	Chr4:54013271-54015401 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008327	lncRNA gene	Chr4:54248238-54250369 (+)
CBA/J	ENSMUSG00210005913	lncRNA gene	Chr4:53908476-53910606 (+)
DBA/2J	ENSMUSG00185019189	lncRNA gene	Chr4:54250042-54252172 (+)
FVB/NJ	ENSMUSG00205020971	lncRNA gene	Chr4:53472266-53474396 (+)
JF1/MsJ	ENSUMUG00000026438	lncRNA gene	Chr4:54460892-54463023 (+)
LP/J	ENSMUSG00230004973	lncRNA gene	Chr4:57802901-57805031 (+)
NOD/ShiLtJ	ENSMUSG00190037862	lncRNA gene	Chr4:54090812-54092942 (+)
NZO/HlLtJ	ENSMUSG00225013495	lncRNA gene	Chr4:62400041-62402171 (+)
PWK/PhJ	ENSLUMG00010007579	lncRNA gene	Chr4:53341824-53343955 (+)
SPRET/EiJ	ENSMSPG00010033111	lncRNA gene	Chr4:54487002-54489141 (+)
WSB/EiJ	ENSIUOG00005023405	lncRNA gene	Chr4:53888361-53890491 (+)

Homology

• Gene Tree
  Gm57068
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000119963 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119963	Ensembl Gene Model | MGI Sequence Detail	15166	C57BL/6J
transcript	ENSMUST00000370898	Ensembl | MGI Sequence Detail	2606	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;