Gm57066 Gene Detail

Summary

• Symbol
  Gm57066
• Name
  predicted gene, 57066

• Feature Type
  lncRNA gene
• IDs
  MGI:7338045
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:128856290-128856966 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338045	lncRNA gene	Chr4:128856290-128856966 (+)
129S1/SvImJ	ENSMUSG00200021074	lncRNA gene	Chr4:122291444-122292018 (+)
A/J	ENSMUSG00195043929	lncRNA gene	Chr4:123632062-123632636 (+)
AKR/J	ENSMUSG00220047660	lncRNA gene	Chr4:122622937-122623511 (+)
BALB/cJ	ENSMUSG00180046694	lncRNA gene	Chr4:121265748-121266322 (+)
C3H/HeJ	ENSMUSG00175027229	lncRNA gene	Chr4:122278374-122278948 (+)
C57BL/6NJ	ENSMUSG00215052220	lncRNA gene	Chr4:123779210-123779784 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048401	lncRNA gene	Chr4:123161188-123161761 (+)
CBA/J	ENSMUSG00210053918	lncRNA gene	Chr4:121907239-121907813 (+)
DBA/2J	ENSMUSG00185052983	lncRNA gene	Chr4:123439805-123440379 (+)
FVB/NJ	ENSMUSG00205028720	lncRNA gene	Chr4:121665430-121666003 (+)
JF1/MsJ	ENSUMUG00000046137	lncRNA gene	Chr4:124083482-124084055 (+)
LP/J	ENSMUSG00230039348	lncRNA gene	Chr4:127228947-127229521 (+)
NOD/ShiLtJ	ENSMUSG00190048866	lncRNA gene	Chr4:121665487-121666061 (+)
NZO/HlLtJ	ENSMUSG00225026780	lncRNA gene	Chr4:133150453-133151027 (+)
PWK/PhJ	ENSLUMG00010051157	lncRNA gene	Chr4:121124376-121124949 (+)
SPRET/EiJ	ENSMSPG00010044512	lncRNA gene	Chr4:123202155-123202726 (+)
WSB/EiJ	ENSIUOG00005047414	lncRNA gene	Chr4:121522917-121523491 (+)

Homology

• Gene Tree
  Gm57066
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120106 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120106	Ensembl Gene Model | MGI Sequence Detail	677	C57BL/6J
transcript	ENSMUST00000241407	Ensembl | MGI Sequence Detail	677	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57066:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr39087	Chr4:128854769-128854785 (+)	-1,513 bp
Tssr39088	Chr4:128856389-128856394 (+)	102 bp