Gm57063 Gene Detail

Summary

• Symbol
  Gm57063
• Name
  predicted gene, 57063

• Feature Type
  lncRNA gene
• IDs
  MGI:7338039
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:75165337-75211019 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1482 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338039	lncRNA gene	Chr4:75165337-75211019 (+)
129S1/SvImJ	ENSMUSG00200000509	lncRNA gene	Chr4:70131412-70145885 (+)
A/J	ENSMUSG00195006046	lncRNA gene	Chr4:70663766-70678177 (+)
AKR/J	ENSMUSG00220018625	lncRNA gene	Chr4:70086607-70101010 (+)
BALB/cJ	ENSMUSG00180000822	lncRNA gene	Chr4:69623357-69637764 (+)
C3H/HeJ	ENSMUSG00175006713	lncRNA gene	Chr4:70584796-70599197 (+)
C57BL/6NJ	ENSMUSG00215000866	lncRNA gene	Chr4:70552324-70566721 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014667	lncRNA gene	Chr4:70150549-70164949 (+)
CBA/J	ENSMUSG00210000621	lncRNA gene	Chr4:70184184-70198593 (+)
DBA/2J	ENSMUSG00185015809	lncRNA gene	Chr4:70728633-70743102 (+)
FVB/NJ	ENSMUSG00205001058	lncRNA gene	Chr4:68945004-68959412 (+)
JF1/MsJ	ENSUMUG00000030092	lncRNA gene	Chr4:71200984-71215369 (+)
LP/J	ENSMUSG00230008865	lncRNA gene	Chr4:74224102-74238571 (+)
NOD/ShiLtJ	ENSMUSG00190009208	lncRNA gene	Chr4:69584876-69599246 (+)
NZO/HlLtJ	ENSMUSG00225028037	lncRNA gene	Chr4:79231419-79250001 (+)
PWK/PhJ	ENSLUMG00010010112	lncRNA gene	Chr4:68981308-68995706 (+)
SPRET/EiJ	ENSMSPG00010005041	lncRNA gene	Chr4:70350884-70373751 (+)
WSB/EiJ	ENSIUOG00005000362	lncRNA gene	Chr4:69954628-69969002 (+)

Homology

• Gene Tree
  Gm57063
  

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000119949 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119949	Ensembl Gene Model | MGI Sequence Detail	45683	C57BL/6J
transcript	ENSMUST00000240787	Ensembl | MGI Sequence Detail	743	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57063:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37645	Chr4:75196585-75196597 (+)	31,254 bp