Gm57062 Gene Detail

Summary

• Symbol
  Gm57062
• Name
  predicted gene, 57062

• Feature Type
  lncRNA gene
• IDs
  MGI:7338037
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:73028423-73040324 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  547 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338037	lncRNA gene	Chr9:73028423-73040324 (-)
129S1/SvImJ	ENSMUSG00200044670	lncRNA gene	Chr9:70095943-70104061 (-)
A/J	ENSMUSG00195027385	lncRNA gene	Chr9:69880818-69888938 (-)
AKR/J	ENSMUSG00220043983	lncRNA gene	Chr9:70045272-70053390 (-)
BALB/cJ	ENSMUSG00180020322	lncRNA gene	Chr9:69995200-70003318 (-)
C3H/HeJ	ENSMUSG00175014277	lncRNA gene	Chr9:70008282-70016400 (-)
C57BL/6NJ	ENSMUSG00215037465	lncRNA gene	Chr9:69979366-69987484 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034570	lncRNA gene	Chr9:69814870-69822950 (-)
CBA/J	ENSMUSG00210014889	lncRNA gene	Chr9:70088843-70096963 (-)
DBA/2J	ENSMUSG00185035985	lncRNA gene	Chr9:70112715-70120831 (-)
FVB/NJ	ENSMUSG00205038967	lncRNA gene	Chr9:70386123-70394237 (-)
JF1/MsJ	ENSUMUG00000042397	lncRNA gene	Chr9:70176216-70185139 (-)
LP/J	ENSMUSG00230028410	lncRNA gene	Chr9:70290889-70299007 (-)
NOD/ShiLtJ	ENSMUSG00190024749	lncRNA gene	Chr9:70216713-70224827 (-)
NZO/HlLtJ	ENSMUSG00225047355	lncRNA gene	Chr9:70419271-70427387 (-)
PWK/PhJ	ENSLUMG00010027742	lncRNA gene	Chr9:70090397-70099320 (-)
SPRET/EiJ	ENSMSPG00010004326	lncRNA gene	Chr9:71175690-71183988 (-)
WSB/EiJ	ENSIUOG00005027957	lncRNA gene	Chr9:69598920-69607038 (-)

Homology

• Gene Tree
  Gm57062
  

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000120840 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120840	Ensembl Gene Model | MGI Sequence Detail	11902	C57BL/6J
transcript	ENSMUST00000246064	Ensembl | MGI Sequence Detail	2062	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57062:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr90509	Chr9:73040296-73040324 (-)	14 bp