Gm57053 Gene Detail

Summary

• Symbol
  Gm57053
• Name
  predicted gene, 57053

• Feature Type
  lncRNA gene
• IDs
  MGI:7338019
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:123741761-123742183 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338019	lncRNA gene	Chr9:123741761-123742183 (-)
129S1/SvImJ	ENSMUSG00200031554	lncRNA gene	Chr9:121212059-121212467 (-)
A/J	ENSMUSG00195028828	lncRNA gene	Chr9:120038421-120038839 (-)
AKR/J	ENSMUSG00220019831	lncRNA gene	Chr9:120487510-120487928 (-)
BALB/cJ	ENSMUSG00180030849	lncRNA gene	Chr9:120578315-120578733 (-)
C3H/HeJ	ENSMUSG00175019919	lncRNA gene	Chr9:120814665-120815083 (-)
C57BL/6NJ	ENSMUSG00215037128	lncRNA gene	Chr9:120728351-120728769 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017474	lncRNA gene	Chr9:120395461-120395880 (-)
CBA/J	ENSMUSG00210042400	lncRNA gene	Chr9:120797895-120798303 (-)
DBA/2J	ENSMUSG00185017417	lncRNA gene	Chr9:120888483-120888891 (-)
FVB/NJ	ENSMUSG00205032377	lncRNA gene	Chr9:120701711-120702130 (-)
JF1/MsJ	ENSUMUG00000050451	lncRNA gene	Chr9:120824946-120825354 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190015435	lncRNA gene	Chr9:120479010-120479429 (-)
NZO/HlLtJ	ENSMUSG00225024034	lncRNA gene	Chr9:121293578-121293997 (-)
PWK/PhJ	ENSLUMG00010039131	lncRNA gene	Chr9:120588464-120588878 (-)
SPRET/EiJ	ENSMSPG00010000532	lncRNA gene	Chr9:122270767-122271183 (-)
WSB/EiJ	ENSIUOG00005022280	lncRNA gene	Chr9:119864081-119864500 (-)

Homology

• Gene Tree
  Gm57053
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000121108 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121108	Ensembl Gene Model | MGI Sequence Detail	423	C57BL/6J
transcript	ENSMUST00000247147	Ensembl | MGI Sequence Detail	423	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57053:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92184	Chr9:123742177-123742190 (-)	-1 bp