Gm57036 Gene Detail

Summary

• Symbol
  Gm57036
• Name
  predicted gene, 57036

• Feature Type
  lncRNA gene
• IDs
  MGI:7337985
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:123356884-123358671 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337985	lncRNA gene	Chr9:123356884-123358671 (-)
129S1/SvImJ	ENSMUSG00200032177	lncRNA gene	Chr9:120492075-120493857 (-)
A/J	ENSMUSG00195028793	lncRNA gene	Chr9:119630833-119632620 (-)
AKR/J	ENSMUSG00220020344	lncRNA gene	Chr9:120097250-120099037 (-)
BALB/cJ	ENSMUSG00180031413	lncRNA gene	Chr9:120170643-120172430 (-)
C3H/HeJ	ENSMUSG00175020032	lncRNA gene	Chr9:120407008-120408795 (-)
C57BL/6NJ	ENSMUSG00215033432	lncRNA gene	Chr9:120320789-120322576 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017558	lncRNA gene	Chr9:119995254-119997044 (-)
CBA/J	ENSMUSG00210044461	lncRNA gene	Chr9:120125343-120127130 (-)
DBA/2J	ENSMUSG00185017592	lncRNA gene	Chr9:120461073-120462860 (-)
FVB/NJ	ENSMUSG00205035224	lncRNA gene	Chr9:120292590-120294377 (-)
JF1/MsJ	ENSUMUG00000048738	lncRNA gene	Chr9:120251830-120253612 (-)
LP/J	ENSMUSG00230037864	lncRNA gene	Chr9:120632195-120633977 (-)
NOD/ShiLtJ	ENSMUSG00190015449	lncRNA gene	Chr9:120068224-120070011 (-)
NZO/HlLtJ	ENSMUSG00225024020	lncRNA gene	Chr9:120886069-120887856 (-)
PWK/PhJ	ENSLUMG00010039116	lncRNA gene	Chr9:120145693-120147476 (-)
SPRET/EiJ	ENSMSPG00010000559	lncRNA gene	Chr9:121903264-121905045 (-)
WSB/EiJ	ENSIUOG00005023572	lncRNA gene	Chr9:119503176-119504963 (-)

Homology

• Gene Tree
  Gm57036
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120906 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120906	Ensembl Gene Model | MGI Sequence Detail	1788	C57BL/6J
transcript	ENSMUST00000246416	Ensembl | MGI Sequence Detail	1788	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57036:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92139	Chr9:123358636-123358676 (-)	15 bp