Gm57022 Gene Detail

Summary

• Symbol
  Gm57022
• Name
  predicted gene, 57022

• Feature Type
  lncRNA gene
• IDs
  MGI:7337957
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:61277976-61279138 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337957	lncRNA gene	Chr9:61277976-61279138 (+)
129S1/SvImJ	ENSMUSG00200036459	lncRNA gene	Chr9:58392408-58393238 (+)
A/J	ENSMUSG00195042455	lncRNA gene	Chr9:58098420-58099250 (+)
AKR/J	ENSMUSG00220033214	lncRNA gene	Chr9:58248500-58249330 (+)
BALB/cJ	ENSMUSG00180020195	lncRNA gene	Chr9:58226040-58226870 (+)
C3H/HeJ	ENSMUSG00175022996	lncRNA gene	Chr9:58230157-58230987 (+)
C57BL/6NJ	ENSMUSG00215034168	lncRNA gene	Chr9:58213211-58214041 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022180	lncRNA gene	Chr9:58141182-58142012 (+)
CBA/J	ENSMUSG00210043511	lncRNA gene	Chr9:58326587-58327417 (+)
DBA/2J	ENSMUSG00185043289	lncRNA gene	Chr9:58352252-58353082 (+)
FVB/NJ	ENSMUSG00205044114	lncRNA gene	Chr9:58667517-58668347 (+)
JF1/MsJ	ENSUMUG00000048071	lncRNA gene	Chr9:58382277-58383107 (+)
LP/J	ENSMUSG00230039974	lncRNA gene	Chr9:58591859-58592689 (+)
NOD/ShiLtJ	ENSMUSG00190043774	lncRNA gene	Chr9:58427231-58428061 (+)
NZO/HlLtJ	ENSMUSG00225028534	lncRNA gene	Chr9:58653271-58654101 (+)
PWK/PhJ	ENSLUMG00010040590	lncRNA gene	Chr9:58339466-58340296 (+)
SPRET/EiJ	ENSMSPG00010027357	lncRNA gene	Chr9:59426542-59427372 (+)
WSB/EiJ	ENSIUOG00005042152	lncRNA gene	Chr9:57827696-57828526 (+)

Homology

• Gene Tree
  Gm57022
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120704 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120704	Ensembl Gene Model | MGI Sequence Detail	1163	C57BL/6J
transcript	ENSMUST00000245320	Ensembl | MGI Sequence Detail	1163	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57022:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr85503	Chr9:61278051-61278089 (+)	94 bp