Gm57021 Gene Detail

Summary

• Symbol
  Gm57021
• Name
  predicted gene, 57021

• Feature Type
  lncRNA gene
• IDs
  MGI:7337955
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr9:76247348-76269481 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  723 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337955	lncRNA gene	Chr9:76247348-76269481 (-)
129S1/SvImJ	ENSMUSG00200019582	lncRNA gene	Chr9:73355159-73382762 (-)
A/J	ENSMUSG00195010989	lncRNA gene	Chr9:73130922-73164189 (-)
AKR/J	ENSMUSG00220015222	lncRNA gene	Chr9:73266186-73298867 (-)
BALB/cJ	ENSMUSG00180018520	lncRNA gene	Chr9:73243534-73277735 (-)
C3H/HeJ	ENSMUSG00175012215	lncRNA gene	Chr9:73279356-73310241 (-)
C57BL/6NJ	ENSMUSG00215015917	lncRNA gene	Chr9:73205980-73227986 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009485	lncRNA gene	Chr9:72946156-72968222 (-)
CBA/J	ENSMUSG00210013374	lncRNA gene	Chr9:73329313-73363223 (-)
DBA/2J	ENSMUSG00185007470	lncRNA gene	Chr9:73364295-73398491 (-)
FVB/NJ	ENSMUSG00205031094	lncRNA gene	Chr9:73639303-73670621 (-)
JF1/MsJ	ENSUMUG00000038132	lncRNA gene	Chr9:73341038-73363666 (-)
LP/J	ENSMUSG00230025305	lncRNA gene	Chr9:73531966-73559581 (-)
NOD/ShiLtJ	ENSMUSG00190034489	lncRNA gene	Chr9:73458958-73494179 (-)
NZO/HlLtJ	ENSMUSG00225026071	lncRNA gene	Chr9:73661755-73695950 (-)
PWK/PhJ	ENSLUMG00010016542	lncRNA gene	Chr9:73256333-73278952 (-)
SPRET/EiJ	ENSMSPG00010004176	lncRNA gene	Chr9:74443745-74465499 (-)
WSB/EiJ	ENSIUOG00005027135	lncRNA gene	Chr9:72806859-72829232 (-)

Homology

• Gene Tree
  Gm57021
  

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000119976 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119976	Ensembl Gene Model | MGI Sequence Detail	22134	C57BL/6J
transcript	ENSMUST00000256068	Ensembl | MGI Sequence Detail	2537	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57021:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr90577	Chr9:76269446-76269458 (-)	29 bp
Tssr90576	Chr9:76269399-76269410 (-)	76 bp