Gm57018 Gene Detail

Summary

• Symbol
  Gm57018
• Name
  predicted gene, 57018

• Feature Type
  lncRNA gene
• IDs
  MGI:7337949
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:67709785-67725364 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  644 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337949	lncRNA gene	Chr9:67709785-67725364 (-)
129S1/SvImJ	ENSMUSG00200044318	lncRNA gene	Chr9:64804047-64819590 (-)
A/J	ENSMUSG00195027513	lncRNA gene	Chr9:64544625-64560477 (-)
AKR/J	ENSMUSG00220043865	lncRNA gene	Chr9:64682588-64698438 (-)
BALB/cJ	ENSMUSG00180019772	lncRNA gene	Chr9:64664130-64679983 (-)
C3H/HeJ	ENSMUSG00175013469	lncRNA gene	Chr9:64677763-64693607 (-)
C57BL/6NJ	ENSMUSG00215034415	lncRNA gene	Chr9:64652360-64667894 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033710	lncRNA gene	Chr9:64551489-64566927 (-)
CBA/J	ENSMUSG00210014582	lncRNA gene	Chr9:64751119-64766435 (-)
DBA/2J	ENSMUSG00185034458	lncRNA gene	Chr9:64776144-64791464 (-)
FVB/NJ	ENSMUSG00205038757	lncRNA gene	Chr9:65086899-65102658 (-)
JF1/MsJ	ENSUMUG00000040454	lncRNA gene	Chr9:64848195-64863957 (-)
LP/J	ENSMUSG00230027680	lncRNA gene	Chr9:65003092-65018637 (-)
NOD/ShiLtJ	ENSMUSG00190023937	lncRNA gene	Chr9:64876188-64891514 (-)
NZO/HlLtJ	ENSMUSG00225046601	lncRNA gene	Chr9:65075721-65091041 (-)
PWK/PhJ	ENSLUMG00010028617	lncRNA gene	Chr9:64803810-64819521 (-)
SPRET/EiJ	ENSMSPG00010023493	lncRNA gene	Chr9:65872457-65887726 (-)
WSB/EiJ	ENSIUOG00005028543	lncRNA gene	Chr9:64257727-64273270 (-)

Homology

• Gene Tree
  Gm57018
  

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000120530 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120530	Ensembl Gene Model | MGI Sequence Detail	15580	C57BL/6J
transcript	ENSMUST00000244009	Ensembl | MGI Sequence Detail	1455	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57018:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr90356	Chr9:67725268-67725306 (-)	77 bp