Gm56995 Gene Detail

Summary

• Symbol
  Gm56995
• Name
  predicted gene, 56995

• Feature Type
  lncRNA gene
• IDs
  MGI:7337903
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:126981138-126981364 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337903	lncRNA gene	Chr10:126981138-126981364 (-)
129S1/SvImJ	ENSMUSG00200013548	lncRNA gene	Chr10:123333891-123334077 (-)
A/J	ENSMUSG00195017296	lncRNA gene	Chr10:123798214-123798400 (-)
AKR/J	ENSMUSG00220006442	lncRNA gene	Chr10:123402511-123402697 (-)
BALB/cJ	ENSMUSG00180011973	lncRNA gene	Chr10:123789288-123789474 (-)
C3H/HeJ	ENSMUSG00175006160	lncRNA gene	Chr10:123787918-123788104 (-)
C57BL/6NJ	ENSMUSG00215018830	lncRNA gene	Chr10:123399309-123399495 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042453	lncRNA gene	Chr10:122760178-122760368 (-)
CBA/J	ENSMUSG00210009410	lncRNA gene	Chr10:123612103-123612289 (-)
DBA/2J	ENSMUSG00185027722	lncRNA gene	Chr10:123764539-123764725 (-)
FVB/NJ	ENSMUSG00205025028	lncRNA gene	Chr10:123017720-123017908 (-)
JF1/MsJ	ENSUMUG00000046813	lncRNA gene	Chr10:125053452-125053638 (-)
LP/J	ENSMUSG00230034510	lncRNA gene	Chr10:125681574-125681760 (-)
NOD/ShiLtJ	ENSMUSG00190015894	lncRNA gene	Chr10:123840222-123840410 (-)
NZO/HlLtJ	ENSMUSG00225038025	lncRNA gene	Chr10:129881793-129881979 (-)
PWK/PhJ	ENSLUMG00010010585	lncRNA gene	Chr10:123513854-123514040 (-)
SPRET/EiJ	ENSMSPG00010039501	lncRNA gene	Chr10:125466933-125467117 (-)
WSB/EiJ	ENSIUOG00005008848	lncRNA gene	Chr10:123398176-123398362 (-)

Homology

• Gene Tree
  Gm56995
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120892 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120892	Ensembl Gene Model | MGI Sequence Detail	227	C57BL/6J
transcript	ENSMUST00000246327	Ensembl | MGI Sequence Detail	227	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56995:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr99719	Chr10:126981325-126981328 (-)	37 bp