Gm56991 Gene Detail

Summary

• Symbol
  Gm56991
• Name
  predicted gene, 56991

• Feature Type
  lncRNA gene
• IDs
  MGI:7337895
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:81477505-81479564 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337895	lncRNA gene	Chr10:81477505-81479564 (-)
129S1/SvImJ	ENSMUSG00200050893	lncRNA gene	Chr10:78104651-78106722 (-)
A/J	ENSMUSG00195049809	lncRNA gene	Chr10:78499953-78502024 (-)
AKR/J	ENSMUSG00220049644	lncRNA gene	Chr10:78097631-78099702 (-)
BALB/cJ	ENSMUSG00180053352	lncRNA gene	Chr10:78510388-78512459 (-)
C3H/HeJ	ENSMUSG00175053126	lncRNA gene	Chr10:78381124-78383195 (-)
C57BL/6NJ	ENSMUSG00215053506	lncRNA gene	Chr10:78123017-78125076 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052220	lncRNA gene	Chr10:78008450-78010519 (-)
CBA/J	ENSMUSG00210049876	lncRNA gene	Chr10:78237167-78239238 (-)
DBA/2J	ENSMUSG00185054462	lncRNA gene	Chr10:78579596-78581667 (-)
FVB/NJ	ENSMUSG00205052286	lncRNA gene	Chr10:78293443-78295514 (-)
JF1/MsJ	ENSUMUG00000055968	lncRNA gene	Chr10:79808880-79810943 (-)
LP/J	ENSMUSG00230051404	lncRNA gene	Chr10:80349154-80351225 (-)
NOD/ShiLtJ	ENSMUSG00190052502	lncRNA gene	Chr10:78493270-78495341 (-)
NZO/HlLtJ	ENSMUSG00225052967	lncRNA gene	Chr10:84635725-84637796 (-)
PWK/PhJ	ENSLUMG00010051682	lncRNA gene	Chr10:78172120-78174189 (-)
SPRET/EiJ	ENSMSPG00010048211	lncRNA gene	Chr10:79782949-79785063 (-)
WSB/EiJ	ENSIUOG00005051469	lncRNA gene	Chr10:78233747-78235818 (-)

Homology

• Gene Tree
  Gm56991
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120847 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120847	Ensembl Gene Model | MGI Sequence Detail	2060	C57BL/6J
transcript	ENSMUST00000246091	Ensembl | MGI Sequence Detail	2060	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56991:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr98663	Chr10:81479570-81479601 (-)	-22 bp