Gm56967 Gene Detail

Summary

• Symbol
  Gm56967
• Name
  predicted gene, 56967

• Feature Type
  lncRNA gene
• IDs
  MGI:7337847
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:86341134-86342555 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337847	lncRNA gene	Chr6:86341134-86342555 (-)
129S1/SvImJ	ENSMUSG00200045432	lncRNA gene	Chr6:83301157-83302547 (-)
A/J	ENSMUSG00195041183	lncRNA gene	Chr6:82985265-82986655 (-)
AKR/J	ENSMUSG00220035947	lncRNA gene	Chr6:81897090-81898479 (-)
BALB/cJ	ENSMUSG00180021061	lncRNA gene	Chr6:83370302-83371691 (-)
C3H/HeJ	ENSMUSG00175040506	lncRNA gene	Chr6:94042709-94044099 (+)
C57BL/6NJ	ENSMUSG00215032510	lncRNA gene	Chr6:83366999-83368388 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018312	lncRNA gene	Chr6:83313094-83314486 (-)
CBA/J	ENSMUSG00210044780	lncRNA gene	Chr6:83176365-83177755 (-)
DBA/2J	ENSMUSG00185044836	lncRNA gene	Chr6:83723520-83724910 (-)
FVB/NJ	ENSMUSG00205040525	lncRNA gene	Chr6:82354374-82355764 (-)
JF1/MsJ	ENSUMUG00000045987	lncRNA gene	Chr6:82673269-82674660 (-)
LP/J	ENSMUSG00230051016	lncRNA gene	Chr6:84857760-84859150 (-)
NOD/ShiLtJ	ENSMUSG00190047367	lncRNA gene	Chr6:82800118-82801508 (-)
NZO/HlLtJ	ENSMUSG00225020235	lncRNA gene	Chr6:86823437-86824826 (-)
PWK/PhJ	ENSLUMG00010034183	lncRNA gene	Chr6:82087406-82088798 (-)
SPRET/EiJ	ENSMSPG00010043710	lncRNA gene	Chr6:84228986-84230382 (-)
WSB/EiJ	ENSIUOG00005033605	lncRNA gene	Chr6:83720763-83722152 (-)

Homology

• Gene Tree
  Gm56967
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120960 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120960	Ensembl Gene Model | MGI Sequence Detail	1422	C57BL/6J
transcript	ENSMUST00000246660	Ensembl | MGI Sequence Detail	1422	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56967:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr61788	Chr6:86342522-86342527 (-)	30 bp