Gm56928 Gene Detail

Summary

• Symbol
  Gm56928
• Name
  predicted gene, 56928

• Feature Type
  lncRNA gene
• IDs
  MGI:7337769
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:49192822-49195255 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337769	lncRNA gene	Chr6:49192822-49195255 (-)
129S1/SvImJ	ENSMUSG00200005249	lncRNA gene	Chr6:46098787-46100878 (-)
A/J	ENSMUSG00195006941	lncRNA gene	Chr6:45868771-45870861 (-)
AKR/J	ENSMUSG00220004524	lncRNA gene	Chr6:45578423-45580514 (-)
BALB/cJ	ENSMUSG00180025134	lncRNA gene	Chr6:46181856-46183947 (-)
C3H/HeJ	ENSMUSG00175018518	lncRNA gene	Chr6:45943428-45945519 (-)
C57BL/6NJ	ENSMUSG00215010131	lncRNA gene	Chr6:46143832-46145923 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005039	lncRNA gene	Chr6:45448871-45450958 (-)
CBA/J	ENSMUSG00210018487	lncRNA gene	Chr6:45988276-45990367 (-)
DBA/2J	ENSMUSG00185014165	lncRNA gene	Chr6:46569983-46572074 (-)
FVB/NJ	ENSMUSG00205030037	lncRNA gene	Chr6:46234478-46236569 (-)
JF1/MsJ	ENSUMUG00000013347	lncRNA gene	Chr6:45943748-45945823 (-)
LP/J	ENSMUSG00230020359	lncRNA gene	Chr6:47595838-47597929 (-)
NOD/ShiLtJ	ENSMUSG00190040862	lncRNA gene	Chr6:45907979-45910069 (-)
NZO/HlLtJ	ENSMUSG00225019764	lncRNA gene	Chr6:49632428-49634519 (-)
PWK/PhJ	ENSLUMG00010022831	lncRNA gene	Chr6:45567593-45569668 (-)
SPRET/EiJ	ENSMSPG00010010080	lncRNA gene	Chr6:46185631-46187706 (-)
WSB/EiJ	ENSIUOG00005028335	lncRNA gene	Chr6:46204603-46206694 (-)

Homology

• Gene Tree
  Gm56928
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120270 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120270	Ensembl Gene Model | MGI Sequence Detail	2434	C57BL/6J
transcript	ENSMUST00000242195	Ensembl | MGI Sequence Detail	2434	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56928:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr60882	Chr6:49194892-49194917 (-)	350 bp