Gm56927 Gene Detail

Summary

• Symbol
  Gm56927
• Name
  predicted gene, 56927

• Feature Type
  lncRNA gene
• IDs
  MGI:7337767
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:88121653-88131980 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  352 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337767	lncRNA gene	Chr6:88121653-88131980 (+)
129S1/SvImJ	ENSMUSG00200044333	lncRNA gene	Chr6:85072402-85073021 (+)
A/J	ENSMUSG00195042086	lncRNA gene	Chr6:84775736-84776355 (+)
AKR/J	ENSMUSG00220036203	lncRNA gene	Chr6:83677050-83677669 (+)
BALB/cJ	ENSMUSG00180018362	lncRNA gene	Chr6:85149664-85150283 (+)
C3H/HeJ	ENSMUSG00175042149	lncRNA gene	Chr6:92248674-92249293 (-)
C57BL/6NJ	ENSMUSG00215035127	lncRNA gene	Chr6:85159164-85159783 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018627	lncRNA gene	Chr6:85079570-85080183 (+)
CBA/J	ENSMUSG00210045551	lncRNA gene	Chr6:84971046-84971665 (+)
DBA/2J	ENSMUSG00185044785	lncRNA gene	Chr6:85518351-85518970 (+)
FVB/NJ	ENSMUSG00205039641	lncRNA gene	Chr6:84144543-84145163 (+)
JF1/MsJ	ENSUMUG00000050676	lncRNA gene	Chr6:84443548-84444165 (+)
LP/J	ENSMUSG00230050507	lncRNA gene	Chr6:86653149-86653768 (+)
NOD/ShiLtJ	ENSMUSG00190045655	lncRNA gene	Chr6:84590186-84590805 (+)
NZO/HlLtJ	ENSMUSG00225021177	lncRNA gene	Chr6:88610720-88611339 (+)
PWK/PhJ	ENSLUMG00010037617	lncRNA gene	Chr6:83867221-83867838 (+)
SPRET/EiJ	ENSMSPG00010044096	lncRNA gene	Chr6:86007590-86008213 (+)
WSB/EiJ	ENSIUOG00005032466	lncRNA gene	Chr6:85497458-85498078 (+)

Homology

• Gene Tree
  Gm56927
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000120157 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120157	Ensembl Gene Model | MGI Sequence Detail	10328	C57BL/6J
transcript	ENSMUST00000241643	Ensembl | MGI Sequence Detail	918	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;