Gm56923 Gene Detail

Summary

• Symbol
  Gm56923
• Name
  predicted gene, 56923

• Feature Type
  lncRNA gene
• IDs
  MGI:7337759
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:32124159-32125037 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337759	lncRNA gene	Chr17:32124159-32125037 (-)
129S1/SvImJ	ENSMUSG00200053976	lncRNA gene	Chr17:27804313-27804959 (-)
A/J	ENSMUSG00195054630	lncRNA gene	Chr17:28744081-28744717 (-)
AKR/J	ENSMUSG00220053456	lncRNA gene	Chr17:27772077-27772713 (-)
BALB/cJ	ENSMUSG00180050804	lncRNA gene	Chr17:28078352-28078998 (-)
C3H/HeJ	ENSMUSG00175054203	lncRNA gene	Chr17:27653239-27653875 (-)
C57BL/6NJ	ENSMUSG00215054502	lncRNA gene	Chr17:27642173-27642819 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052101	lncRNA gene	Chr17:28658364-28659010 (-)
CBA/J	ENSMUSG00210050978	lncRNA gene	Chr17:27480161-27480797 (-)
DBA/2J	ENSMUSG00185054476	lncRNA gene	Chr17:30090325-30090971 (-)
FVB/NJ	ENSMUSG00205053828	lncRNA gene	Chr17:27965546-27966192 (-)
JF1/MsJ	ENSUMUG00000057721	lncRNA gene	Chr17:29386744-29387390 (-)
LP/J	ENSMUSG00230054862	lncRNA gene	Chr17:31202831-31203477 (-)
NOD/ShiLtJ	ENSMUSG00190054173	lncRNA gene	Chr17:27602143-27602779 (-)
NZO/HlLtJ	ENSMUSG00225055071	lncRNA gene	Chr17:33239811-33240457 (-)
PWK/PhJ	ENSLUMG00010053340	lncRNA gene	Chr17:27222409-27223055 (-)
SPRET/EiJ	ENSMSPG00010049840	lncRNA gene	Chr17:28335953-28336599 (-)
WSB/EiJ	ENSIUOG00005051446	lncRNA gene	Chr17:28354798-28355434 (-)

Homology

• Gene Tree
  Gm56923
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121243 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121243	Ensembl Gene Model | MGI Sequence Detail	879	C57BL/6J
transcript	ENSMUST00000247563	Ensembl | MGI Sequence Detail	879	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56923:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr147338	Chr17:32124824-32124844 (-)	203 bp