Gm56922 Gene Detail

Summary

• Symbol
  Gm56922
• Name
  predicted gene, 56922

• Feature Type
  lncRNA gene
• IDs
  MGI:7337757
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:84435397-84435889 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337757	lncRNA gene	Chr17:84435397-84435889 (-)
129S1/SvImJ	ENSMUSG00200025242	lncRNA gene	Chr17:79835076-79835528 (-)
A/J	ENSMUSG00195030953	lncRNA gene	Chr17:81208536-81208988 (-)
AKR/J	ENSMUSG00220014064	lncRNA gene	Chr17:80166039-80166491 (-)
BALB/cJ	ENSMUSG00180027628	lncRNA gene	Chr17:80880096-80880548 (-)
C3H/HeJ	ENSMUSG00175016265	lncRNA gene	Chr17:80146932-80147384 (-)
C57BL/6NJ	ENSMUSG00215018890	lncRNA gene	Chr17:79873581-79874033 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011921	lncRNA gene	Chr17:80701074-80701524 (-)
CBA/J	ENSMUSG00210021166	lncRNA gene	Chr17:80005673-80006125 (-)
DBA/2J	ENSMUSG00185021494	lncRNA gene	Chr17:82829612-82830063 (-)
FVB/NJ	ENSMUSG00205033249	lncRNA gene	Chr17:80643331-80643783 (-)
JF1/MsJ	ENSUMUG00000018972	lncRNA gene	Chr17:82561881-82562332 (-)
LP/J	ENSMUSG00230010252	lncRNA gene	Chr17:83853578-83854030 (-)
NOD/ShiLtJ	ENSMUSG00190009905	lncRNA gene	Chr17:79911075-79911527 (-)
NZO/HlLtJ	ENSMUSG00225031519	lncRNA gene	Chr17:86113453-86113905 (-)
PWK/PhJ	ENSLUMG00010005538	lncRNA gene	Chr17:79764870-79765321 (-)
SPRET/EiJ	ENSMSPG00010008937	lncRNA gene	Chr17:80327622-80328074 (-)
WSB/EiJ	ENSIUOG00005010930	lncRNA gene	Chr17:80826771-80827223 (-)

Homology

• Gene Tree
  Gm56922
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121234 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121234	Ensembl Gene Model | MGI Sequence Detail	493	C57BL/6J
transcript	ENSMUST00000247540	Ensembl | MGI Sequence Detail	493	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56922:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr149638	Chr17:84435810-84435824 (-)	72 bp