Gm56911 Gene Detail

Summary

• Symbol
  Gm56911
• Name
  predicted gene, 56911

• Feature Type
  lncRNA gene
• IDs
  MGI:7337735
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:15924693-15925141 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337735	lncRNA gene	Chr17:15924693-15925141 (-)
129S1/SvImJ	ENSMUSG00200039491	lncRNA gene	Chr17:11535925-11536348 (-)
A/J	ENSMUSG00195038973	lncRNA gene	Chr17:12293377-12293800 (-)
AKR/J	ENSMUSG00220027375	lncRNA gene	Chr17:11954574-11954997 (-)
BALB/cJ	ENSMUSG00180018407	lncRNA gene	Chr17:11533811-11534234 (-)
C3H/HeJ	ENSMUSG00175041418	lncRNA gene	Chr17:11431740-11432163 (-)
C57BL/6NJ	ENSMUSG00215042955	lncRNA gene	Chr17:11633059-11633482 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022909	lncRNA gene	Chr17:11947181-11947605 (-)
CBA/J	ENSMUSG00210043947	lncRNA gene	Chr17:11275810-11276233 (-)
DBA/2J	ENSMUSG00185041351	lncRNA gene	Chr17:13261986-13262409 (-)
FVB/NJ	ENSMUSG00205033636	lncRNA gene	Chr17:11944022-11944445 (-)
JF1/MsJ	ENSUMUG00000036993	lncRNA gene	Chr17:12824979-12825404 (-)
LP/J	ENSMUSG00230028195	lncRNA gene	Chr17:14660232-14660655 (-)
NOD/ShiLtJ	ENSMUSG00190040894	lncRNA gene	Chr17:11693996-11694419 (-)
NZO/HlLtJ	ENSMUSG00225048928	lncRNA gene	Chr17:16613809-16614232 (-)
PWK/PhJ	ENSLUMG00010020321	lncRNA gene	Chr17:11532726-11533151 (-)
SPRET/EiJ	ENSMSPG00010040598	lncRNA gene	Chr17:12843524-12843947 (-)
WSB/EiJ	ENSIUOG00005040729	lncRNA gene	Chr17:12284812-12285235 (-)

Homology

• Gene Tree
  Gm56911
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120176 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120176	Ensembl Gene Model | MGI Sequence Detail	449	C57BL/6J
transcript	ENSMUST00000241745	Ensembl | MGI Sequence Detail	449	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56911:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr146529	Chr17:15925054-15925072 (-)	78 bp