Gm56910 Gene Detail

Summary

• Symbol
  Gm56910
• Name
  predicted gene, 56910

• Feature Type
  lncRNA gene
• IDs
  MGI:7337733
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:47169148-47169281 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337733	lncRNA gene	Chr17:47169148-47169281 (+)
129S1/SvImJ	ENSMUSG00200028258	lncRNA gene	Chr17:42367519-42367652 (+)
A/J	ENSMUSG00195022578	lncRNA gene	Chr17:43872600-43872733 (+)
AKR/J	ENSMUSG00220037411	lncRNA gene	Chr17:42866415-42866548 (+)
BALB/cJ	ENSMUSG00180025337	lncRNA gene	Chr17:43622743-43622876 (+)
C3H/HeJ	ENSMUSG00175017061	lncRNA gene	Chr17:42936654-42936787 (+)
C57BL/6NJ	ENSMUSG00215035412	lncRNA gene	Chr17:42492015-42492148 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025269	lncRNA gene	Chr17:43655720-43655858 (+)
CBA/J	ENSMUSG00210038102	lncRNA gene	Chr17:42686329-42686462 (+)
DBA/2J	ENSMUSG00185030828	lncRNA gene	Chr17:45591744-45591877 (+)
FVB/NJ	ENSMUSG00205053185	lncRNA gene	Chr17:43162904-43163037 (+)
JF1/MsJ	ENSUMUG00000040386	lncRNA gene	Chr17:45210233-45210362 (+)
LP/J	ENSMUSG00230041655	lncRNA gene	Chr17:46484346-46484479 (+)
NOD/ShiLtJ	ENSMUSG00190018383	lncRNA gene	Chr17:42573712-42573841 (+)
NZO/HlLtJ	ENSMUSG00225043836	lncRNA gene	Chr17:48738883-48739016 (+)
PWK/PhJ	ENSLUMG00010037997	lncRNA gene	Chr17:42445669-42445802 (+)
SPRET/EiJ	ENSMSPG00010038495	lncRNA gene	Chr17:42651769-42651902 (+)
WSB/EiJ	ENSIUOG00005027983	lncRNA gene	Chr17:43536141-43536274 (+)

Homology

• Gene Tree
  Gm56910
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121152 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121152	Ensembl Gene Model | MGI Sequence Detail	134	C57BL/6J
transcript	ENSMUST00000247318	Ensembl | MGI Sequence Detail	134	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56910:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144886	Chr17:47169143-47169178 (+)	13 bp