Gm56905 Gene Detail

Summary

• Symbol
  Gm56905
• Name
  predicted gene, 56905

• Feature Type
  lncRNA gene
• IDs
  MGI:7337723
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:86733997-86752335 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  868 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337723	lncRNA gene	Chr17:86733997-86752335 (-)
129S1/SvImJ	ENSMUSG00200022967	lncRNA gene	Chr17:82155147-82155810 (-)
A/J	ENSMUSG00195029674	lncRNA gene	Chr17:83536178-83536841 (-)
AKR/J	ENSMUSG00220016554	lncRNA gene	Chr17:82485573-82486236 (-)
BALB/cJ	ENSMUSG00180028389	lncRNA gene	Chr17:83208364-83209027 (-)
C3H/HeJ	ENSMUSG00175007110	lncRNA gene	Chr17:82474263-82474926 (-)
C57BL/6NJ	ENSMUSG00215023736	lncRNA gene	Chr17:82194506-82195169 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011841	lncRNA gene	Chr17:83030265-83030943 (-)
CBA/J	ENSMUSG00210022444	lncRNA gene	Chr17:82332974-82333637 (-)
DBA/2J	ENSMUSG00185021140	lncRNA gene	Chr17:85153000-85153663 (-)
FVB/NJ	ENSMUSG00205006375	lncRNA gene	Chr17:82959066-82959729 (-)
JF1/MsJ	ENSUMUG00000017270	lncRNA gene	Chr17:84889085-84889748 (-)
LP/J	ENSMUSG00230010671	lncRNA gene	Chr17:86180774-86181437 (-)
NOD/ShiLtJ	ENSMUSG00190009689	lncRNA gene	Chr17:82231415-82232078 (-)
NZO/HlLtJ	ENSMUSG00225031016	lncRNA gene	Chr17:88440034-88440697 (-)
PWK/PhJ	ENSLUMG00010033057	lncRNA gene	Chr17:82097426-82098089 (-)
SPRET/EiJ	ENSMSPG00010021075	lncRNA gene	Chr17:82679124-82679819 (-)
WSB/EiJ	ENSIUOG00005022631	lncRNA gene	Chr17:83154042-83154705 (-)

Homology

• Gene Tree
  Gm56905
  

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000121124 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121124	Ensembl Gene Model | MGI Sequence Detail	18339	C57BL/6J
transcript	ENSMUST00000287965	Ensembl | MGI Sequence Detail	1164	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56905:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr149737	Chr17:86752292-86752332 (-)	23 bp