Gm56901 Gene Detail

Summary

• Symbol
  Gm56901
• Name
  predicted gene, 56901

• Feature Type
  lncRNA gene
• IDs
  MGI:7337715
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:35115894-35116370 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337715	lncRNA gene	Chr17:35115894-35116370 (+)
129S1/SvImJ	ENSMUSG00200051666	lncRNA gene	Chr17:30819081-30819557 (+)
A/J	ENSMUSG00195047056	lncRNA gene	Chr17:31719241-31719717 (+)
AKR/J	ENSMUSG00220052336	lncRNA gene	Chr17:30747921-30748397 (+)
BALB/cJ	ENSMUSG00180043945	lncRNA gene	Chr17:31089109-31089585 (+)
C3H/HeJ	ENSMUSG00175045631	lncRNA gene	Chr17:30634040-30634516 (+)
C57BL/6NJ	ENSMUSG00215053101	lncRNA gene	Chr17:30659273-30659750 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052472	lncRNA gene	Chr17:31677802-31678272 (+)
CBA/J	ENSMUSG00210052478	lncRNA gene	Chr17:30456148-30456624 (+)
DBA/2J	ENSMUSG00185054390	lncRNA gene	Chr17:33108366-33108842 (+)
DBA/2J	ENSMUSG00185010820	lncRNA gene	Chr13:61095422-61095882 (-)
FVB/NJ	ENSMUSG00205053548	lncRNA gene	Chr17:30977862-30978339 (+)
JF1/MsJ	ENSUMUG00000057218	lncRNA gene	Chr17:32361209-32361678 (+)
LP/J	ENSMUSG00230054811	lncRNA gene	Chr17:34217338-34217814 (+)
NOD/ShiLtJ	ENSMUSG00190053768	lncRNA gene	Chr17:30578889-30579359 (+)
NOD/ShiLtJ	ENSMUSG00190041390	lncRNA gene	Chr13:60004778-60005248 (-)
NZO/HlLtJ	ENSMUSG00225054890	lncRNA gene	Chr17:36230486-36230958 (+)
PWK/PhJ	ENSLUMG00010046405	lncRNA gene	Chr17:30195739-30196209 (+)
SPRET/EiJ	ENSMSPG00010050080	lncRNA gene	Chr17:31382447-31382914 (+)
WSB/EiJ	ENSIUOG00005051617	lncRNA gene	Chr17:31306450-31306920 (+)

Homology

• Gene Tree
  Gm56901
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000121067 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121067	Ensembl Gene Model | MGI Sequence Detail	477	C57BL/6J
transcript	ENSMUST00000247060	Ensembl | MGI Sequence Detail	477	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56901:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144128	Chr17:35115934-35115953 (+)	50 bp