Gm56883 Gene Detail

Summary

• Symbol
  Gm56883
• Name
  predicted gene, 56883

• Feature Type
  lncRNA gene
• IDs
  MGI:7337679
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:79662547-79663924 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337679	lncRNA gene	Chr17:79662547-79663924 (-)
129S1/SvImJ	ENSMUSG00200024957	lncRNA gene	Chr17:75022272-75022807 (-)
A/J	ENSMUSG00195028378	lncRNA gene	Chr17:76377111-76377646 (-)
AKR/J	ENSMUSG00220013978	lncRNA gene	Chr17:75284814-75285349 (-)
BALB/cJ	ENSMUSG00180005036	lncRNA gene	Chr17:76086828-76087363 (-)
C3H/HeJ	ENSMUSG00175016717	lncRNA gene	Chr17:75364682-75365217 (-)
C57BL/6NJ	ENSMUSG00215015307	lncRNA gene	Chr17:75089765-75090300 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015562	lncRNA gene	Chr17:75957357-75957892 (-)
CBA/J	ENSMUSG00210020596	lncRNA gene	Chr17:75228028-75228563 (-)
DBA/2J	ENSMUSG00185012897	lncRNA gene	Chr17:78061546-78062081 (-)
FVB/NJ	ENSMUSG00205031931	lncRNA gene	Chr17:75842673-75843208 (-)
JF1/MsJ	ENSUMUG00000024920	lncRNA gene	Chr17:77769224-77769759 (-)
LP/J	ENSMUSG00230022064	lncRNA gene	Chr17:79063145-79063680 (-)
NOD/ShiLtJ	ENSMUSG00190009810	lncRNA gene	Chr17:75126798-75127333 (-)
NZO/HlLtJ	ENSMUSG00225031567	lncRNA gene	Chr17:81324116-81324651 (-)
PWK/PhJ	ENSLUMG00010005715	lncRNA gene	Chr17:75014830-75015365 (-)
SPRET/EiJ	ENSMSPG00010008924	lncRNA gene	Chr17:75475988-75476523 (-)
WSB/EiJ	ENSIUOG00005010686	lncRNA gene	Chr17:76061821-76062356 (-)

Homology

• Gene Tree
  Gm56883
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120330 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120330	Ensembl Gene Model | MGI Sequence Detail	1378	C57BL/6J
transcript	ENSMUST00000242573	Ensembl | MGI Sequence Detail	1378	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;