Gm56874 Gene Detail

Summary

• Symbol
  Gm56874
• Name
  predicted gene, 56874

• Feature Type
  lncRNA gene
• IDs
  MGI:7337661
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:70963078-70965321 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337661	lncRNA gene	Chr8:70963078-70965321 (+)
129S1/SvImJ	ENSMUSG00200033861	lncRNA gene	Chr8:65760540-65761396 (+)
A/J	ENSMUSG00195017673	lncRNA gene	Chr8:66093958-66094790 (+)
AKR/J	ENSMUSG00220025061	lncRNA gene	Chr8:66005925-66006792 (+)
BALB/cJ	ENSMUSG00180030024	lncRNA gene	Chr8:65736954-65737812 (+)
C3H/HeJ	ENSMUSG00175022439	lncRNA gene	Chr8:66016887-66017742 (+)
C57BL/6NJ	ENSMUSG00215037217	lncRNA gene	Chr8:65696443-65697276 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040635	lncRNA gene	Chr8:65491931-65492775 (+)
CBA/J	ENSMUSG00210034857	lncRNA gene	Chr8:65782455-65783310 (+)
DBA/2J	ENSMUSG00185013124	lncRNA gene	Chr8:71942062-71942916 (+)
FVB/NJ	ENSMUSG00205044272	lncRNA gene	Chr8:65286678-65287536 (+)
JF1/MsJ	ENSUMUG00000041411	lncRNA gene	Chr8:74222353-74223185 (+)
LP/J	ENSMUSG00230035112	lncRNA gene	Chr8:75553619-75554474 (+)
NOD/ShiLtJ	ENSMUSG00190031917	lncRNA gene	Chr8:65703567-65704399 (+)
NZO/HlLtJ	ENSMUSG00225048444	lncRNA gene	Chr8:78962773-78963628 (+)
PWK/PhJ	ENSLUMG00010035066	lncRNA gene	Chr8:65679371-65680203 (+)
SPRET/EiJ	ENSMSPG00010042300	lncRNA gene	Chr8:67369607-67370129 (+)
WSB/EiJ	ENSIUOG00005027410	lncRNA gene	Chr8:66573462-66574329 (+)

Homology

• Gene Tree
  Gm56874
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000121178 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121178	Ensembl Gene Model | MGI Sequence Detail	2244	C57BL/6J
transcript	ENSMUST00000247394	Ensembl | MGI Sequence Detail	853	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;