Gm56867 Gene Detail

Summary

• Symbol
  Gm56867
• Name
  predicted gene, 56867

• Feature Type
  lncRNA gene
• IDs
  MGI:7337647
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr8:85796615-85798786 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  182 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337647	lncRNA gene	Chr8:85796615-85798786 (-)
129S1/SvImJ	ENSMUSG00200026095	lncRNA gene	Chr8:80162930-80163620 (-)
A/J	ENSMUSG00195018493	lncRNA gene	Chr8:80520969-80521648 (-)
AKR/J	ENSMUSG00220023738	lncRNA gene	Chr8:80562557-80563248 (-)
BALB/cJ	ENSMUSG00180026278	lncRNA gene	Chr8:80361658-80362349 (-)
C3H/HeJ	ENSMUSG00175027690	lncRNA gene	Chr8:80456645-80457324 (-)
C57BL/6NJ	ENSMUSG00215023442	lncRNA gene	Chr8:80094425-80095110 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038765	lncRNA gene	Chr8:79970952-79971631 (-)
CBA/J	ENSMUSG00210039506	lncRNA gene	Chr8:80443769-80444448 (-)
DBA/2J	ENSMUSG00185039002	lncRNA gene	Chr8:86552357-86553036 (-)
FVB/NJ	ENSMUSG00205039558	lncRNA gene	Chr8:79499623-79500302 (-)
JF1/MsJ	ENSUMUG00000041109	lncRNA gene	Chr8:88861079-88861763 (-)
LP/J	ENSMUSG00230030593	lncRNA gene	Chr8:90159914-90160604 (-)
NOD/ShiLtJ	ENSMUSG00190017319	lncRNA gene	Chr8:80520082-80520761 (-)
NZO/HlLtJ	ENSMUSG00225040671	lncRNA gene	Chr8:93555115-93555799 (-)
PWK/PhJ	ENSLUMG00010029406	lncRNA gene	Chr8:80198074-80198757 (-)
SPRET/EiJ	ENSMSPG00010032369	lncRNA gene	Chr8:82110442-82111119 (-)
WSB/EiJ	ENSIUOG00005019840	lncRNA gene	Chr8:81257690-81258380 (-)

Homology

• Gene Tree
  Gm56867
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000121028 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121028	Ensembl Gene Model | MGI Sequence Detail	2172	C57BL/6J
transcript	ENSMUST00000251836	Ensembl | MGI Sequence Detail	734	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm56867:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr82241	Chr8:85798731-85798754 (-)	43 bp
Tssr82240	Chr8:85798704-85798715 (-)	76 bp