Gm56864 Gene Detail

Summary

• Symbol
  Gm56864
• Name
  predicted gene, 56864

• Feature Type
  lncRNA gene
• IDs
  MGI:7337641
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:46616008-46616986 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337641	lncRNA gene	Chr8:46616008-46616986 (-)
129S1/SvImJ	ENSMUSG00200006854	lncRNA gene	Chr8:41728467-41728798 (-)
A/J	ENSMUSG00195004324	lncRNA gene	Chr8:42220668-42220999 (-)
AKR/J	ENSMUSG00220004772	lncRNA gene	Chr8:42037430-42037761 (-)
BALB/cJ	ENSMUSG00180002945	lncRNA gene	Chr8:41761691-41762022 (-)
C3H/HeJ	ENSMUSG00175005473	lncRNA gene	Chr8:41890025-41890356 (-)
C57BL/6NJ	ENSMUSG00215010617	lncRNA gene	Chr8:41692778-41693109 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019788	lncRNA gene	Chr8:41732816-41733147 (-)
CBA/J	ENSMUSG00210019029	lncRNA gene	Chr8:41786187-41786518 (-)
DBA/2J	ENSMUSG00185006307	lncRNA gene	Chr8:47632545-47632876 (-)
FVB/NJ	ENSMUSG00205002849	lncRNA gene	Chr8:40915809-40916140 (-)
JF1/MsJ	ENSUMUG00000014660	lncRNA gene	Chr8:49302884-49303215 (-)
LP/J	ENSMUSG00230018509	lncRNA gene	Chr8:51325129-51325460 (-)
NOD/ShiLtJ	ENSMUSG00190006281	lncRNA gene	Chr8:41805628-41805959 (-)
NZO/HlLtJ	ENSMUSG00225011964	lncRNA gene	Chr8:54918783-54919114 (-)
PWK/PhJ	ENSLUMG00010010063	lncRNA gene	Chr8:41577680-41578011 (-)
SPRET/EiJ	ENSMSPG00010006003	lncRNA gene	Chr8:42431137-42431468 (-)
WSB/EiJ	ENSIUOG00005002566	lncRNA gene	Chr8:42643230-42643561 (-)

Homology

• Gene Tree
  Gm56864
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000120575 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120575	Ensembl Gene Model | MGI Sequence Detail	979	C57BL/6J
transcript	ENSMUST00000244272	Ensembl | MGI Sequence Detail	703	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56864:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr81191	Chr8:46616572-46616606 (-)	397 bp