Gm56863 Gene Detail

Summary

• Symbol
  Gm56863
• Name
  predicted gene, 56863

• Feature Type
  lncRNA gene
• IDs
  MGI:7337639
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:3720375-3720528 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337639	lncRNA gene	Chr8:3720375-3720528 (-)
129S1/SvImJ	ENSMUSG00200012341	lncRNA gene	Chr8:541404-541557 (-)
A/J	ENSMUSG00195011368	lncRNA gene	Chr8:945641-945794 (-)
AKR/J	ENSMUSG00220011280	lncRNA gene	Chr8:672175-672328 (-)
BALB/cJ	ENSMUSG00180004768	lncRNA gene	Chr8:596126-596279 (-)
C3H/HeJ	ENSMUSG00175008413	lncRNA gene	Chr8:710731-710884 (-)
C57BL/6NJ	ENSMUSG00215009720	lncRNA gene	Chr8:625085-625238 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020429	lncRNA gene	Chr8:682950-683103 (-)
CBA/J	ENSMUSG00210011024	lncRNA gene	Chr8:588300-588453 (-)
DBA/2J	ENSMUSG00185004148	lncRNA gene	Chr8:724347-724500 (-)
FVB/NJ	ENSMUSG00205005774	lncRNA gene	Chr8:658165-658318 (-)
JF1/MsJ	ENSUMUG00000043723	lncRNA gene	Chr8:678060-678213 (-)
LP/J	ENSMUSG00230007834	lncRNA gene	Chr8:2893941-2894094 (-)
NOD/ShiLtJ	ENSMUSG00190012049	lncRNA gene	Chr8:698361-698514 (-)
NZO/HlLtJ	ENSMUSG00225019615	lncRNA gene	Chr8:10759188-10759341 (-)
PWK/PhJ	ENSLUMG00010011595	lncRNA gene	Chr8:635313-635466 (-)
SPRET/EiJ	ENSMSPG00010016926	lncRNA gene	Chr8:608497-608650 (-)
WSB/EiJ	ENSIUOG00005005063	lncRNA gene	Chr8:632825-632978 (-)

Homology

• Gene Tree
  Gm56863
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121099 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121099	Ensembl Gene Model | MGI Sequence Detail	154	C57BL/6J
transcript	ENSMUST00000247125	Ensembl | MGI Sequence Detail	154	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56863:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr80219	Chr8:3720523-3720526 (-)	3 bp