Gm56825 Gene Detail

Summary

• Symbol
  Gm56825
• Name
  predicted gene, 56825

• Feature Type
  lncRNA gene
• IDs
  MGI:7337563
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:13250642-13252233 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337563	lncRNA gene	Chr8:13250642-13252233 (-)
129S1/SvImJ	ENSMUSG00200033130	lncRNA gene	Chr8:10144336-10145076 (-)
A/J	ENSMUSG00195043328	lncRNA gene	Chr8:10493879-10494619 (-)
AKR/J	ENSMUSG00220033085	lncRNA gene	Chr8:10223148-10223888 (-)
BALB/cJ	ENSMUSG00180026779	lncRNA gene	Chr8:10132980-10133721 (-)
C3H/HeJ	ENSMUSG00175041468	lncRNA gene	Chr8:10292795-10293535 (-)
C57BL/6NJ	ENSMUSG00215026978	lncRNA gene	Chr8:10167152-10167893 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019389	lncRNA gene	Chr8:10141851-10142600 (-)
CBA/J	ENSMUSG00210041844	lncRNA gene	Chr8:10126634-10127374 (-)
DBA/2J	ENSMUSG00185006970	lncRNA gene	Chr8:10259388-10260128 (-)
FVB/NJ	ENSMUSG00205036978	lncRNA gene	Chr8:10152103-10152843 (-)
JF1/MsJ	ENSUMUG00000034083	lncRNA gene	Chr8:10280455-10281204 (-)
LP/J	ENSMUSG00230024611	lncRNA gene	Chr8:12439023-12439772 (-)
NOD/ShiLtJ	ENSMUSG00190042278	lncRNA gene	Chr8:10251481-10252221 (-)
NZO/HlLtJ	ENSMUSG00225042765	lncRNA gene	Chr8:20304298-20305038 (-)
PWK/PhJ	ENSLUMG00010032092	lncRNA gene	Chr8:10207350-10208099 (-)
SPRET/EiJ	ENSMSPG00010014394	lncRNA gene	Chr8:10318838-10319600 (-)
WSB/EiJ	ENSIUOG00005022768	lncRNA gene	Chr8:10158477-10159217 (-)

Homology

• Gene Tree
  Gm56825
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000120359 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120359	Ensembl Gene Model | MGI Sequence Detail	1592	C57BL/6J
transcript	ENSMUST00000242777	Ensembl | MGI Sequence Detail	810	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14