Gm56795 Gene Detail

Summary

• Symbol
  Gm56795
• Name
  predicted gene, 56795

• Feature Type
  lncRNA gene
• IDs
  MGI:7337503
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:89121224-89122075 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337503	lncRNA gene	Chr3:89121224-89122075 (+)
129S1/SvImJ	ENSMUSG00200039874	lncRNA gene	Chr3:85976237-85977055 (+)
A/J	ENSMUSG00195053817	lncRNA gene	Chr3:85991291-85992106 (+)
AKR/J	ENSMUSG00220051287	lncRNA gene	Chr3:85945873-85946688 (+)
BALB/cJ	ENSMUSG00180049062	lncRNA gene	Chr3:86073034-86073852 (+)
C3H/HeJ	ENSMUSG00175049816	lncRNA gene	Chr3:85923935-85924750 (+)
C57BL/6NJ	ENSMUSG00215049955	lncRNA gene	Chr3:86363989-86364807 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048925	lncRNA gene	Chr3:85439082-85439898 (+)
CBA/J	ENSMUSG00210048039	lncRNA gene	Chr3:86061588-86062403 (+)
DBA/2J	ENSMUSG00185052995	lncRNA gene	Chr3:86161528-86162346 (+)
FVB/NJ	ENSMUSG00205050502	lncRNA gene	Chr3:84985534-84986349 (+)
JF1/MsJ	ENSUMUG00000052753	lncRNA gene	Chr3:85770021-85770839 (+)
LP/J	ENSMUSG00230036606	lncRNA gene	Chr3:88197561-88198379 (+)
NOD/ShiLtJ	ENSMUSG00190049723	lncRNA gene	Chr3:86446454-86447272 (+)
NZO/HlLtJ	ENSMUSG00225007752	lncRNA gene	Chr3:90952900-90953715 (+)
PWK/PhJ	ENSLUMG00010052739	lncRNA gene	Chr3:85811581-85812397 (+)
SPRET/EiJ	ENSMSPG00010050688	lncRNA gene	Chr3:86673258-86674081 (+)
WSB/EiJ	ENSIUOG00005050388	lncRNA gene	Chr3:86467988-86468802 (+)

Homology

• Gene Tree
  Gm56795
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120758 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120758	Ensembl Gene Model | MGI Sequence Detail	852	C57BL/6J
transcript	ENSMUST00000245643	Ensembl | MGI Sequence Detail	852	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56795:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr30070	Chr3:89121233-89121251 (+)	18 bp