Gm56770 Gene Detail

Summary

• Symbol
  Gm56770
• Name
  predicted gene, 56770

• Feature Type
  lncRNA gene
• IDs
  MGI:7337453
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:68124068-68124369 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337453	lncRNA gene	Chr14:68124068-68124369 (-)
129S1/SvImJ	ENSMUSG00200031953	lncRNA gene	Chr14:56741770-56742071 (-)
A/J	ENSMUSG00195016020	lncRNA gene	Chr14:56906783-56907084 (-)
AKR/J	ENSMUSG00220033140	lncRNA gene	Chr14:56247382-56247683 (-)
BALB/cJ	ENSMUSG00180036734	lncRNA gene	Chr14:56522927-56523228 (-)
C3H/HeJ	ENSMUSG00175041605	lncRNA gene	Chr14:58278274-58278575 (-)
C57BL/6NJ	ENSMUSG00215027915	lncRNA gene	Chr14:56459375-56459676 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039115	lncRNA gene	Chr14:58172244-58172544 (-)
CBA/J	ENSMUSG00210043148	lncRNA gene	Chr14:56895412-56895713 (-)
DBA/2J	ENSMUSG00185023980	lncRNA gene	Chr14:62076077-62076378 (-)
FVB/NJ	ENSMUSG00205037445	lncRNA gene	Chr14:56409542-56409843 (-)
JF1/MsJ	ENSUMUG00000044136	lncRNA gene	Chr14:73250025-73250326 (-)
LP/J	ENSMUSG00230017047	lncRNA gene	Chr14:74105213-74105514 (-)
NOD/ShiLtJ	ENSMUSG00190041624	lncRNA gene	Chr14:56688609-56688910 (-)
NZO/HlLtJ	ENSMUSG00225040274	lncRNA gene	Chr14:64421439-64421740 (-)
PWK/PhJ	ENSLUMG00010039737	lncRNA gene	Chr14:56130108-56130409 (-)
SPRET/EiJ	ENSMSPG00010036487	lncRNA gene	Chr14:59627393-59627693 (-)
WSB/EiJ	ENSIUOG00005040875	lncRNA gene	Chr14:56145572-56145873 (-)

Homology

• Gene Tree
  Gm56770
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000121014 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000121014	Ensembl Gene Model | MGI Sequence Detail	302	C57BL/6J
transcript	ENSMUST00000246865	Ensembl | MGI Sequence Detail	302	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56770:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr129394	Chr14:68124380-68124384 (-)	-13 bp