Gm56764 Gene Detail

Summary

• Symbol
  Gm56764
• Name
  predicted gene, 56764

• Feature Type
  lncRNA gene
• IDs
  MGI:7337441
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr14:20132456-20132853 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337441	lncRNA gene	Chr14:20132456-20132853 (-)
129S1/SvImJ	ENSMUSG00200015772	lncRNA gene	Chr14:11911020-11911417 (-)
A/J	ENSMUSG00195023236	lncRNA gene	Chr14:13005109-13005506 (-)
AKR/J	ENSMUSG00220027231	lncRNA gene	Chr14:12135600-12135997 (-)
BALB/cJ	ENSMUSG00180040860	lncRNA gene	Chr14:12100008-12100405 (-)
C3H/HeJ	ENSMUSG00175024432	lncRNA gene	Chr14:12161082-12161479 (-)
C57BL/6NJ	ENSMUSG00215031809	lncRNA gene	Chr14:12350602-12350999 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031791	lncRNA gene	Chr14:12280502-12280899 (-)
CBA/J	ENSMUSG00210026893	lncRNA gene	Chr14:12384178-12384575 (-)
DBA/2J	ENSMUSG00185039009	lncRNA gene	Chr14:16669203-16669600 (-)
FVB/NJ	ENSMUSG00205040407	lncRNA gene	Chr14:12224743-12225140 (-)
JF1/MsJ	ENSUMUG00000046079	lncRNA gene	Chr14:23880024-23880421 (-)
LP/J	ENSMUSG00230040772	lncRNA gene	Chr14:23951037-23951434 (-)
NOD/ShiLtJ	ENSMUSG00190037129	lncRNA gene	Chr14:12383072-12383469 (-)
NZO/HlLtJ	ENSMUSG00225036654	lncRNA gene	Chr14:18193472-18193869 (-)
PWK/PhJ	ENSLUMG00010021393	lncRNA gene	Chr14:459115-459512 (-)
SPRET/EiJ	ENSMSPG00010032019	lncRNA gene	Chr14:14019274-14019671 (-)
WSB/EiJ	ENSIUOG00005034723	lncRNA gene	Chr14:12215392-12215789 (-)

Homology

• Gene Tree
  Gm56764
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120818 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120818	Ensembl Gene Model | MGI Sequence Detail	398	C57BL/6J
transcript	ENSMUST00000245954	Ensembl | MGI Sequence Detail	398	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56764:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr127587	Chr14:20132827-20132860 (-)	9 bp
Tssr127586	Chr14:20132802-20132815 (-)	44 bp
Tssr127585	Chr14:20132743-20132770 (-)	96 bp