Gm56763 Gene Detail

Summary

• Symbol
  Gm56763
• Name
  predicted gene, 56763

• Feature Type
  lncRNA gene
• IDs
  MGI:7337439
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:99576561-99680385 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3282 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337439	lncRNA gene	Chr14:99576561-99680385 (+)
129S1/SvImJ	ENSMUSG00200019560	lncRNA gene	Chr14:88106705-88118935 (+)
A/J	ENSMUSG00195019645	lncRNA gene	Chr14:88280759-88293017 (+)
AKR/J	ENSMUSG00220002526	lncRNA gene	Chr14:87699345-87711600 (+)
BALB/cJ	ENSMUSG00180004682	lncRNA gene	Chr14:87763628-87775886 (+)
C3H/HeJ	ENSMUSG00175002625	lncRNA gene	Chr14:89629863-89642117 (+)
C57BL/6NJ	ENSMUSG00215018952	lncRNA gene	Chr14:87813192-87825361 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016363	lncRNA gene	Chr14:89254497-89266691 (+)
CBA/J	ENSMUSG00210007810	lncRNA gene	Chr14:88333047-88345303 (+)
DBA/2J	ENSMUSG00185011457	lncRNA gene	Chr14:93517165-93529419 (+)
FVB/NJ	ENSMUSG00205013349	lncRNA gene	Chr14:87421313-87433571 (+)
JF1/MsJ	ENSUMUG00000013142	lncRNA gene	Chr14:104474357-104486519 (+)
LP/J	ENSMUSG00230003928	lncRNA gene	Chr14:105347484-105359721 (+)
NOD/ShiLtJ	ENSMUSG00190009640	lncRNA gene	Chr14:88102269-88114427 (+)
NZO/HlLtJ	ENSMUSG00225025355	lncRNA gene	Chr14:95754739-95766901 (+)
PWK/PhJ	ENSLUMG00010004806	lncRNA gene	Chr14:87373923-87386171 (+)
SPRET/EiJ	ENSMSPG00010009636	lncRNA gene	Chr14:91276635-91288745 (+)
WSB/EiJ	ENSIUOG00005018188	lncRNA gene	Chr14:87313851-87326180 (+)

Homology

• Gene Tree
  Gm56763
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000120791 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120791	Ensembl Gene Model | MGI Sequence Detail	103825	C57BL/6J
transcript	ENSMUST00000291776	Ensembl | MGI Sequence Detail	1727	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Gm56763:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr126893	Chr14:99576572-99576615 (+)	33 bp